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101-days-python

Want to join the course? Start your journey here: https://100daysofpython.dev/

anticp2

AntiCP2 is an updated version of AntiCP developed for predicting, designing and scanning anticancer peptides.

antigen.garnish

antonie

Antonie is an integrated, robust, reliable and fast processor of DNA reads

awesome-bioinformatics

A curated list of awesome Bioinformatics libraries and software.

awesome-mac

 Now we have become very big, Different from the original idea. Collect premium software in various categories.

awesome-single-cell

Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.

awesome-structural-bioinformatics

Structural Bioinformatics is awesome. Throw your textbook in the garbage, light the garbage can on fire, and blend the ashes into your cold brew almond milk latte and read this.

bioactivity-prediction-app

bioconda-recipes

Conda recipes for the bioconda channel.

bioinfo_pipelines

bioinformatics_freecodecamp

bioinformatics_scripts

Some Python/R/* scripts for bioinformatics

bioptools

Tools making use of BiopLib

biorabiei

Config files for my GitHub profile.

biostat-578

A repository for all of my teaching material

biotech-1400

chimera

chipper

Fast proteasomal cleavage detection. Apache-licensed.

cicero

CICERO: a versatile method for detecting complex and diverse driver fusions using cancer RNA sequencing data.

circtools

circtools: a modular, python-based framework for circRNA-related tools that unifies several functionalities in a single, command line driven software.

cleaver

Cleavage of polypeptide sequences

colab-cheat-sheet

Colab management guidelines for Hertie classes

colabfold

Making Protein folding accessible to all via Google Colab!

consensusml

Machine Learning to Detect Cancer Biomarkers from RNAseq Data

cornea

protein interface prediction method

coursera_bioinformatics_and_genetic_algorithm_experiment

Code relating to the Coursera Bioinformatics Specialization as well as my own genetic algorithm experiment.

covid-notebooks

Jupyter notebooks that analyze COVID-19 time series data

covid19-forecast-hub

Projections of COVID-19, in standardized format

csvkit

A suite of utilities for converting to and working with CSV, the king of tabular file formats.