Comments (2)
directly is from openfold/utils/import_weights.py", line 325, in generate_translation_dict
ems_blocks = model.extra_msa_stack.blocks
from alphaflow.
https://github.com/bjing2016/alphaflow/blob/master/train.py#L142
should change mode.esmfold to model.model. this fixed above error
from alphaflow.
Related Issues (20)
- PPI ensembles HOT 2
- Dockerfile or CUDA 12 HOT 2
- Diffuse selected residues
- Issues with CUDA12 and or G++17 HOT 1
- Command options' help messages in predict.py missing HOT 1
- Appropriate `model_config` arguments for initial training upon predicting with long sequence HOT 2
- Generating Abnormal PDB results HOT 2
- missing scripts.prep_atlas.py file HOT 1
- The size of tensor a (184) must match the size of tensor b (183) at non-singleton dimension 1 HOT 1
- Availability of MD Ensemble Evaluation Scripts HOT 2
- Training with PDBs
- The distance between adjacent alpha carbons is not 3.8 A from the Prior
- Example Input Files Not Working HOT 3
- Colab notebook HOT 1
- TypeError: __init__() missing 1 required positional argument: 'no_column_attention' HOT 5
- Multimer HOT 2
- scripts.unpack_mmcif.py reference to outdated betafold? HOT 1
- Installation fails on Cuda12 HOT 3
- PDB as input
Recommend Projects
-
React
A declarative, efficient, and flexible JavaScript library for building user interfaces.
-
Vue.js
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
-
Typescript
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
-
TensorFlow
An Open Source Machine Learning Framework for Everyone
-
Django
The Web framework for perfectionists with deadlines.
-
Laravel
A PHP framework for web artisans
-
D3
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
-
Recommend Topics
-
javascript
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
-
web
Some thing interesting about web. New door for the world.
-
server
A server is a program made to process requests and deliver data to clients.
-
Machine learning
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
-
Visualization
Some thing interesting about visualization, use data art
-
Game
Some thing interesting about game, make everyone happy.
Recommend Org
-
Facebook
We are working to build community through open source technology. NB: members must have two-factor auth.
-
Microsoft
Open source projects and samples from Microsoft.
-
Google
Google ❤️ Open Source for everyone.
-
Alibaba
Alibaba Open Source for everyone
-
D3
Data-Driven Documents codes.
-
Tencent
China tencent open source team.
from alphaflow.