Comments (6)
Could you check something for me? Can you first install/upgrade wheel and setuptools: pip install --upgrade wheel setuptools
and then try the install again? I'm shipping binaries in addition to source, so ideally you shouldn't need to build cnmrstar at all.
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They may have an older glibc, too, if they have a pre-c-99 gcc, in which case the prebuilt binary could fail to load.
{
int I;
(for I ...
}
should make that last-century-proof (in squigglies if you need to limit the I
's scope to the for
loop)
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Hey Gary,
The first thing I do in a new virtual environment is to upgrade pip
, wheel
, and setuptools
before installing any other required packages - it fixes a lot of issues and so far hasn't caused any. So in response to your question, yes, I would recommend that if anyone is having problems installing PyNMR-STAR that they take those steps first.
Dimitri - thanks for the backwards-compatible suggestion, but I just don't have the bandwidth to support end-of-life platforms.
If the pip/wheel/setuptools solution doesn't work, PyNMR-STAR prior to 3.2 (I believe) has a fall-back pure python parser - or one could fork cnmrstar, fix any issues, install it first, and then install PyNMR-STAR.
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Related Issues (20)
- If loading an entry fails with a 403, implement an exponential back off and retry rather than throwing an IOError
- Change write_to_file() defaults to preserve empty tags and loops HOT 1
- Problem frame without tags won't print loop HOT 4
- Files without categories read ok HOT 2
- loop with no data warnings HOT 3
- A typo in error message HOT 2
- pynmrstar library should not use logging.basicConfig HOT 3
- odd behaviour of frame_codes HOT 2
- pynmrstar should use its own logger?! HOT 4
- get Loop tags without category HOT 5
- read rows in loops as a dictionary HOT 11
- should PyNMRSTAR describe itself as a star file parser HOT 7
- running the tests fails with missing file naughty-strings/blns.json HOT 1
- tests fail with missing file /naughty-strings/blns.json HOT 3
- Is uniform indenting possible HOT 5
- changing the category of a frame corrupts the sf_category tag HOT 2
- warnings give no information about location of deprecations in user code HOT 2
- read the docs page doesn't have a link to the GitHub repo HOT 1
- Example Project showing how simple its is to read NEF with PyNMRStar HOT 1
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