boston123456 Goto Github PK

adv-r

Advanced R programming: a book

aerosolve

A machine learning package built for humans.

applied-deep-learning-with-python

Applied Deep Learning with Python, published by Packt

appyter-catalog

A catalog of appyter notebooks

ardnmf

A Python 3 implementation of automatic-relevance determination NMF (Tan & Fevotte 2013) based on their original implementation

awesome-deepbio

A curated list of awesome deep learning applications in the field of computational biology

awesome-multimodal-ml

Reading list for research topics in multimodal machine learning

bcea

Bayesian Cost Effectiveness Analysis. Given the results of a Bayesian model (possibly based on MCMC) in the form of simulations from the posterior distributions of suitable variables of costs and clinical benefits for two or more interventions, produces a health economic evaluation. Compares one of the interventions (the "reference") to the others ("comparators"). Produces many summary and plots to analyse the results

bhi-bsn-challenge

Repository for the IEEE BHI-BSN MIMIC-III Challenge

biaae

Molecular Generation for Desired Transcriptome Changes with Adversarial Autoencoders

binet

Deep Learning package for Python

biomarker-survival

Utilities for performing biomarker survival analyses (e.g. cox proportional hazards, kaplan-meier, etc) from TCGA, CBioPortal, and other datasets

bmeta

Bayesian meta-analysis & meta-regression in R

boston123456.github.io

Boston123456's first github pages

causal_inference_python_code

Python code for part 2 of the book Causal Inference, by Miguel Hernán and James Robins

causalimpact

An R package for causal inference in time series

cellnopt

Tool for training of logic models of signalling networks using prior knowledge networks and perturbation data.

cenpa-sdl

Uses DepMap datasets and tumor data to identify SDL partners of CENPA. In collaboration with the Basrai Group at NCI.

cfrnet

Counterfactual Regression

chemgan-challenge

Code for the paper: Benhenda, M. 2017. ChemGAN challenge for drug discovery: can AI reproduce natural chemical diversity? arXiv preprint arXiv:1708.08227.

chemprop

Message Passing Neural Networks for Molecule Property Prediction

class3

cmapm

Connectivity Map analysis in MATLAB

commondatamodel

Definition and DDLs for the OMOP Common Data Model (CDM)

comparison-study-of-germline-cnv-calling-tools

comprehensive-tcga-survival

Comprehensive survival analyses on the TCGA data.

continuoustimemarkovmodel

Continuous-time Markov model with discrete observations

cyclops

Cyclops (Cyclic coordinate descent for logistic, Poisson and survival analysis) is an R package for performing large scale regularized regressions.

datasharing

The Leek group guide to data sharing

deep-learning-covid-19-on-cxr-using-limited-training-data-sets