Comments (5)
The version you installed by 'pip install braincog' is inconsistent with the online version on GitHub. You can clone braincog from github(see https://www.brain-cog.network/docs/tutorial/1_installation.html):
git clone https://github.com/braincog-X/Brain-Cog.git
cd Brain-Cog
pip install -e .
Or you can copy the code of HHNode and aEIF in braincog/base/node/node.py on github
from brain-cog.
Thanks for getting back to me on this.
What version of Python do you typically use?
Also, I actually followed the install tutorial
https://www.youtube.com/watch?v=XkHq-MbKo20&list=PLNXUFsTshMlYTW6oleY5YjVEfnoQSw0N7&index=2
with references to the Brain Cod Github repo information as well.
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I did a clean re-install of Brain Cog and things seem to run now with just on "UserWarning"
D:\BrainCog\Brain-Cog\examples\Multiscale_Brain_Structure_Simulation\HumanBrain\human_brain.py:201: UserWarning: To copy construct from a tensor, it is recommended to use sourceTensor.clone().detach() or sourceTensor.clone().detach().requires_grad_(True), rather than torch.tensor(sourceTensor).
Iraster = torch.tensor(Iraster).transpose(0, 1)
Also, is there somewhere I can get the paper since I do not have access to this particular one from where I am at:
@article{Liu2016,
author={Liu, Xin and Zeng, Yi and Zhang, Tielin and Xu, Bo},
title={Parallel Brain Simulator: A Multi-scale and Parallel Brain-Inspired Neural Network Modeling and Simulation Platform},
journal={Cognitive Computation},
year={2016},
month={Oct},
day={01},
volume={8},
number={5},
pages={967--981},
issn={1866-9964},
doi={10.1007/s12559-016-9411-y},
url={https://doi.org/10.1007/s12559-016-9411-y}
from brain-cog.
I think a python version over 3.7 is sufficient.
The methods in this article are not what our current code uses. I share the paper in the following link:
https://drive.google.com/file/d/1p-ewKNzUFaAgf3jKa0FcE-yWPHI7iWoT/view?usp=sharing
from brain-cog.
Thanks for the quick response and for the paper link that I will read with great interest.
I will give the Python 3.7 a try to see how it runs the examples to see how that goes.
Eventually, I would like to see about adding some new models to the Brain Cog Model_Zoo since I think that it could be helpful for the eventual modeling of a virtual full brain simulation towards AGI.
One step forward would be to work out a good spiking RNN approach for a Question & Answering system maybe building on something in the "Knowledge Representation and Reasoning" section.
Thanks again
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