bryan-lunt Goto Github PK

beast2

Bayesian Evolutionary Analysis by Sampling Trees

beastii

Import from http://code.google.com/p/beastii/

bryan-lunt.github.io

My Github.io page.

bryansclusterutils

A collection of small utilities and fragments that make life easier on PBS based clusters.

btc_address_checker

Simple script to check if addresses still have balance.

dca-portal

basic portal container for dcatest

dca_pipeline_services

Docker containers and other things to implement a simple DCA pipeline.

deepcontact

DeepContact Software

drosophila_ortholog_finder

Simple in-house tools for finding orthologous enhancers in Drosophila genomes.

evfoldreimp

A clean-room reimplementation of Chris Sander / Debora S Marks' EVFold

execnet

Cloned from https://bitbucket.org/hpk42/execnet and converted from hg

experiment_output_caching

A simple framework for caching outputs of time-consuming processes. Intended for scientific pipelines.

flashairdownloader

Scripts and whatnot for a Raspberry Pi based NAS which has specific features for photo storage.

gatein-wcm

GateIn WCM Service

gemstat

Thermodynamics-based models of transcriptional regulation by enhancers: the roles of synergistic activation, cooperative binding and short-range repression

gemstat_refinement_sampler

A tool to allow meaningful comparison of different refinement methods for GEMSTAT models.

gemstat_scripts

Various task-agnostic scripting language tools for dealing with GEMSTAT.

gs2

gusfieldphylo

Implementation of Dan Gusfield's perfect phylogeny algorithm.

hips_spearmint

Spearmint Bayesian optimization codebase

ind_variance

Tools for measuring the GEMSTAT variance.

jupyter-docker-stacks

Opinionated stacks of ready-to-run Jupyter applications in Docker.

keras

Deep Learning library for Python. Convnets, recurrent neural networks, and more. Runs on Theano and TensorFlow.

kos

Fully programmable autopilot mod for KSP. Originally By Nivekk

ksp_gmat

Tools to allow the use of NASA's GMAT for Kerbal Space Program mission planning. Definitely overkill for a videogame, but that's what I enjoy.

kspsavefileeditor

KSP Savefile Editor

lendingclub

A Python API for LendingClub

lost_jars

Jar files that have become unavailable on the internet due to bitrot. I need these. Will turn into a proper maven repo someday.

lx50solarautoguider

An autoguider that allows an LX50 mount to be used with solar telescopes.

meade4504control

Tools for probing the control protocol of the Mead 4504, and eventually for creating a replacement controller.