Brandon Saint-John's Projects
vim configuration file
Plugins for Anki on the desktop
Derive for arrow2
Teaching the fundamentals of bioinformatics and data science. BD2K Summer Workshop 2016
Build Your Own Redis (in Rust)
Tool to analyze chromatin accessibility with long read sequencing technologies
Collection of random bioinformatics algorithms I've (tried to) implement
My implementation of D.I.A.W (DNS In A Weekend)
Ultra-fast methylation calling and event alignment tool for nanopore sequencing data (supports CUDA acceleration)
Junction Based Analysis of Splicing Events for RNA-Seq
A tool for detecting and quantifying alternative splicing with RNA-seq
A versatile pairwise aligner for genomic and spliced nucleotide sequences
Implementing hash tables in rust
Rust library to support interacting with Oxford Nanopore POD5 files
Implementation of Ray Tracer in One X
Implementation of Reinforcement Learning Algorithms. Python, OpenAI Gym, Tensorflow. Exercises and Solutions to accompany Sutton's Book and David Silver's course.
PyMC3 educational resources
Robustats is a Python library for high-performance computation of robust statistical estimators.