Comments (2)
from bap.
Thanks, I didn't notice it.
Z
from bap.
Related Issues (20)
- width - fragment - parameter
- add other genome HOT 22
- Significantly different clustering results from bap BAM compared to original HOT 8
- Error running bap-frag HOT 4
- bap-barcode generated zero outputs HOT 6
- Regenerate the fragment for the human/mouse cell line in the Nature Biotechnology paper HOT 6
- bap-barcode extremely low success rate HOT 3
- bap-barcode v2.1 generate truncated fasta file HOT 2
- GRCh38/mm10 species mixing genome --mito-chromosome HOT 5
- execution_error HOT 3
- Error in generating `*frag.bedpe.annotated.tsv` file HOT 2
- Write raw barcode and corrected barcode in FASTQ name comment section so bwa -C can write the BAM tags directly HOT 9
- ValueError: invalid contig `chrM` HOT 6
- Error in .subset2(x, i, exact = exact) : subscript out of bounds HOT 5
- Many barcodes failed to pass Knee filtering HOT 1
- remove fragments in blacklist and mito when computing knee and jaccard?
- rapidfuzz not present in bap Python package dependencies HOT 2
- bam file for bap2 input HOT 2
- Support .csi index
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from bap.