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Annotated data.
tools and notes for spatial omics
a generalist algorithm for cellular segmentation with human-in-the-loop capabilities
An open-source application for biological image analysis
Open-source software for exploring and analyzing large, high-dimensional image-derived data.
Community-contributed and experimental CellProfiler modules.
Examples using Clustergrammer2 to explore high-dimensional datasets.
Fiji's plugin for colocalization analysis
Core classes and components used by CellProfiler
A short script for converting .csv file data into an .fcs file, and vise versa.
Visualization of highly multiplexed imaging data
Cytoscape plugin for SPADE
Deep Learning Library for Single Cell Analysis
Deep learning-based cell segmentation tool for imaging mass cytometry
Dimensionality reduction (UMAP, t-SNE, PCA) for ImageJ/Fiji
Publication-ready volcano plots with enhanced colouring and labeling
Using self-organizing maps for visualization and interpretation of cytometry data
HipDynamics is a data analytics middleware that allows you to slice multi-dimensional data sets according to a pre-defined context.
Histology Topography Cytometry Analysis Toolbox
ilastik-shell, applets, and workflows to string them together.
ImaCytE is an interactive tool for data-driven exploration of Imaging Mass Cytometry data as presented in the paper "ImaCytE: Visual Exploration of Cellular Micro-environments for Imaging Mass Cytometry Data".
This repository hosts an R based workflow to perform downstream analysis of IMC data.
ExperimentHub collection of imaging mass cytometry datasets
CellProfiler plugins for multiplexed image analysis
An R package for handling and analysing imaging mass cytometry data
A pixel classification based multiplexed image segmentation pipeline
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.