Comments (4)
cbergmeir
commented on August 28, 2024
Hi,
well, I don't get the error. Normally it should be compiled by gcc. I'd
need more details such as operating system and what exactly you are
trying to do.
Regards,
Christoph
On 11/09/2015 05:57 PM, lasoncheng wrote:
Hello cbergmeri, When I installed package R, error occurs. The error is
"make: *** [RSNNS.so] Error 1
ERROR: compilation failed for package 'RSNNS' ". I find RSNNS is
compiled by clang. But I use gcc to compile it. Is this an reason for
this question? I am looking forward to your reply. Thanks！！！—
Reply to this email directly or view it on GitHub
#4.
from rsnns.
lasoncheng
commented on August 28, 2024
Thanks for reply. The detail information is as follows:
System info:2.6.32-358.el6.x86_64 #1 SMP Fri Feb 22 00:31:26 UTC 2013 x86_64 x86_64 x86_64 GNU/Linux (centos6.5)
I use two ways to install RSNNS.(R CMD INSTALL RSNNS_0.4-7.tar.gz or rpmbuild -ba RSNNS.spec )
logs:
- installing source package 'RSNNS' ...
** package 'RSNNS' successfully unpacked and MD5 sums checked
** libs
g++ -I/usr/lib64/R/include -DNDEBUG -DR_USE_C99_IN_CXX -I/usr/local/include -I"/usr/lib64/R/library/Rcpp/include" -fpic -g -O2 -c SnnsCLib.cpp -o SnnsCLib.o
gcc -std=gnu99 -I/usr/lib64/R/include -DNDEBUG -DR_USE_C99_IN_CXX -I/usr/local/include -I"/usr/lib64/R/library/Rcpp/include" -fpic -g -O2 -c SnnsCLibGenericR_util.c -o SnnsCLibGenericR_util.o
g++ -I/usr/lib64/R/include -DNDEBUG -DR_USE_C99_IN_CXX -I/usr/local/include -I"/usr/lib64/R/library/Rcpp/include" -fpic -g -O2 -c SnnsCLibWrapper.cpp -o SnnsCLibWrapper.o
g++ -I/usr/lib64/R/include -DNDEBUG -DR_USE_C99_IN_CXX -I/usr/local/include -I"/usr/lib64/R/library/Rcpp/include" -fpic -g -O2 -c art_ui.cpp -o art_ui.o
g++ -I/usr/lib64/R/include -DNDEBUG -DR_USE_C99_IN_CXX -I/usr/local/include -I"/usr/lib64/R/library/Rcpp/include" -fpic -g -O2 -c arttr_f.cpp -o arttr_f.o
g++ -I/usr/lib64/R/include -DNDEBUG -DR_USE_C99_IN_CXX -I/usr/local/include -I"/usr/lib64/R/library/Rcpp/include" -fpic -g -O2 -c bn_JordElm.cpp -o bn_JordElm.o
g++ -I/usr/lib64/R/include -DNDEBUG -DR_USE_C99_IN_CXX -I/usr/local/include -I"/usr/lib64/R/library/Rcpp/include" -fpic -g -O2 -c bn_art1.cpp -o bn_art1.o
g++ -I/usr/lib64/R/include -DNDEBUG -DR_USE_C99_IN_CXX -I/usr/local/include -I"/usr/lib64/R/library/Rcpp/include" -fpic -g -O2 -c bn_art2.cpp -o bn_art2.o
g++ -I/usr/lib64/R/include -DNDEBUG -DR_USE_C99_IN_CXX -I/usr/local/include -I"/usr/lib64/R/library/Rcpp/include" -fpic -g -O2 -c bn_artmap.cpp -o bn_artmap.o
g++ -I/usr/lib64/R/include -DNDEBUG -DR_USE_C99_IN_CXX -I/usr/local/include -I"/usr/lib64/R/library/Rcpp/include" -fpic -g -O2 -c bn_assoz.cpp -o bn_assoz.o
g++ -I/usr/lib64/R/include -DNDEBUG -DR_USE_C99_IN_CXX -I/usr/local/include -I"/usr/lib64/R/library/Rcpp/include" -fpic -g -O2 -c bn_kohonen.cpp -o bn_kohonen.o
g++ -I/usr/lib64/R/include -DNDEBUG -DR_USE_C99_IN_CXX -I/usr/local/include -I"/usr/lib64/R/library/Rcpp/include" -fpic -g -O2 -c cc_display.cpp -o cc_display.o
g++ -I/usr/lib64/R/include -DNDEBUG -DR_USE_C99_IN_CXX -I/usr/local/include -I"/usr/lib64/R/library/Rcpp/include" -fpic -g -O2 -c cc_glob.cpp -o cc_glob.o
g++ -I/usr/lib64/R/include -DNDEBUG -DR_USE_C99_IN_CXX -I/usr/local/include -I"/usr/lib64/R/library/Rcpp/include" -fpic -g -O2 -c cc_learn.cpp -o cc_learn.o
g++ -I/usr/lib64/R/include -DNDEBUG -DR_USE_C99_IN_CXX -I/usr/local/include -I"/usr/lib64/R/library/Rcpp/include" -fpic -g -O2 -c cc_modify.cpp -o cc_modify.o
g++ -I/usr/lib64/R/include -DNDEBUG -DR_USE_C99_IN_CXX -I/usr/local/include -I"/usr/lib64/R/library/Rcpp/include" -fpic -g -O2 -c cc_prune.cpp -o cc_prune.o
g++ -I/usr/lib64/R/include -DNDEBUG -DR_USE_C99_IN_CXX -I/usr/local/include -I"/usr/lib64/R/library/Rcpp/include" -fpic -g -O2 -c dlvq_learn.cpp -o dlvq_learn.o
g++ -I/usr/lib64/R/include -DNDEBUG -DR_USE_C99_IN_CXX -I/usr/local/include -I"/usr/lib64/R/library/Rcpp/include" -fpic -g -O2 -c func_tbl.cpp -o func_tbl.o
g++ -I/usr/lib64/R/include -DNDEBUG -DR_USE_C99_IN_CXX -I/usr/local/include -I"/usr/lib64/R/library/Rcpp/include" -fpic -g -O2 -c init_f.cpp -o init_f.o
g++ -I/usr/lib64/R/include -DNDEBUG -DR_USE_C99_IN_CXX -I/usr/local/include -I"/usr/lib64/R/library/Rcpp/include" -fpic -g -O2 -c kernel.cpp -o kernel.o
g++ -I/usr/lib64/R/include -DNDEBUG -DR_USE_C99_IN_CXX -I/usr/local/include -I"/usr/lib64/R/library/Rcpp/include" -fpic -g -O2 -c kr_JordElm.cpp -o kr_JordElm.o
g++ -I/usr/lib64/R/include -DNDEBUG -DR_USE_C99_IN_CXX -I/usr/local/include -I"/usr/lib64/R/library/Rcpp/include" -fpic -g -O2 -c kr_amap.cpp -o kr_amap.o
g++ -I/usr/lib64/R/include -DNDEBUG -DR_USE_C99_IN_CXX -I/usr/local/include -I"/usr/lib64/R/library/Rcpp/include" -fpic -g -O2 -c kr_art.cpp -o kr_art.o
g++ -I/usr/lib64/R/include -DNDEBUG -DR_USE_C99_IN_CXX -I/usr/local/include -I"/usr/lib64/R/library/Rcpp/include" -fpic -g -O2 -c kr_art1.cpp -o kr_art1.o
g++ -I/usr/lib64/R/include -DNDEBUG -DR_USE_C99_IN_CXX -I/usr/local/include -I"/usr/lib64/R/library/Rcpp/include" -fpic -g -O2 -c kr_art2.cpp -o kr_art2.o
g++ -I/usr/lib64/R/include -DNDEBUG -DR_USE_C99_IN_CXX -I/usr/local/include -I"/usr/lib64/R/library/Rcpp/include" -fpic -g -O2 -c kr_funcs.cpp -o kr_funcs.o
g++ -I/usr/lib64/R/include -DNDEBUG -DR_USE_C99_IN_CXX -I/usr/local/include -I"/usr/lib64/R/library/Rcpp/include" -fpic -g -O2 -c kr_inversion.cpp -o kr_inversion.o
g++ -I/usr/lib64/R/include -DNDEBUG -DR_USE_C99_IN_CXX -I/usr/local/include -I"/usr/lib64/R/library/Rcpp/include" -fpic -g -O2 -c kr_io.cpp -o kr_io.o
g++ -I/usr/lib64/R/include -DNDEBUG -DR_USE_C99_IN_CXX -I/usr/local/include -I"/usr/lib64/R/library/Rcpp/include" -fpic -g -O2 -c kr_mem.cpp -o kr_mem.o
g++ -I/usr/lib64/R/include -DNDEBUG -DR_USE_C99_IN_CXX -I/usr/local/include -I"/usr/lib64/R/library/Rcpp/include" -fpic -g -O2 -c kr_newpattern.cpp -o kr_newpattern.o
g++ -I/usr/lib64/R/include -DNDEBUG -DR_USE_C99_IN_CXX -I/usr/local/include -I"/usr/lib64/R/library/Rcpp/include" -fpic -g -O2 -c kr_pat_parse.cpp -o kr_pat_parse.o
g++ -I/usr/lib64/R/include -DNDEBUG -DR_USE_C99_IN_CXX -I/usr/local/include -I"/usr/lib64/R/library/Rcpp/include" -fpic -g -O2 -c kr_pat_scan.cpp -o kr_pat_scan.o
g++ -I/usr/lib64/R/include -DNDEBUG -DR_USE_C99_IN_CXX -I/usr/local/include -I"/usr/lib64/R/library/Rcpp/include" -fpic -g -O2 -c kr_td.cpp -o kr_td.o
g++ -I/usr/lib64/R/include -DNDEBUG -DR_USE_C99_IN_CXX -I/usr/local/include -I"/usr/lib64/R/library/Rcpp/include" -fpic -g -O2 -c kr_ui.cpp -o kr_ui.o
g++ -I/usr/lib64/R/include -DNDEBUG -DR_USE_C99_IN_CXX -I/usr/local/include -I"/usr/lib64/R/library/Rcpp/include" -fpic -g -O2 -c learn_f.cpp -o learn_f.o
g++ -I/usr/lib64/R/include -DNDEBUG -DR_USE_C99_IN_CXX -I/usr/local/include -I"/usr/lib64/R/library/Rcpp/include" -fpic -g -O2 -c matrix.cpp -o matrix.o
g++ -I/usr/lib64/R/include -DNDEBUG -DR_USE_C99_IN_CXX -I/usr/local/include -I"/usr/lib64/R/library/Rcpp/include" -fpic -g -O2 -c prun_f.cpp -o prun_f.o
g++ -I/usr/lib64/R/include -DNDEBUG -DR_USE_C99_IN_CXX -I/usr/local/include -I"/usr/lib64/R/library/Rcpp/include" -fpic -g -O2 -c remap_f.cpp -o remap_f.o
g++ -I/usr/lib64/R/include -DNDEBUG -DR_USE_C99_IN_CXX -I/usr/local/include -I"/usr/lib64/R/library/Rcpp/include" -fpic -g -O2 -c scaled_conj_grad.cpp -o scaled_conj_grad.o
g++ -I/usr/lib64/R/include -DNDEBUG -DR_USE_C99_IN_CXX -I/usr/local/include -I"/usr/lib64/R/library/Rcpp/include" -fpic -g -O2 -c stochastic_learn_f.cpp -o stochastic_learn_f.o
g++ -I/usr/lib64/R/include -DNDEBUG -DR_USE_C99_IN_CXX -I/usr/local/include -I"/usr/lib64/R/library/Rcpp/include" -fpic -g -O2 -c tacoma_learn.cpp -o tacoma_learn.o
g++ -I/usr/lib64/R/include -DNDEBUG -DR_USE_C99_IN_CXX -I/usr/local/include -I"/usr/lib64/R/library/Rcpp/include" -fpic -g -O2 -c tbl_func.cpp -o tbl_func.o
g++ -I/usr/lib64/R/include -DNDEBUG -DR_USE_C99_IN_CXX -I/usr/local/include -I"/usr/lib64/R/library/Rcpp/include" -fpic -g -O2 -c trans_f.cpp -o trans_f.o
g++ -I/usr/lib64/R/include -DNDEBUG -DR_USE_C99_IN_CXX -I/usr/local/include -I"/usr/lib64/R/library/Rcpp/include" -fpic -g -O2 -c u_lrand48.cpp -o u_lrand48.o
g++ -I/usr/lib64/R/include -DNDEBUG -DR_USE_C99_IN_CXX -I/usr/local/include -I"/usr/lib64/R/library/Rcpp/include" -fpic -g -O2 -c update_f.cpp -o update_f.o
Loading required package: discoverR
Loading required package: rJava
Loading required package: stringr
g++ -shared -L/usr/lib64/R/lib -L/usr/local/lib64 -o RSNNS.so SnnsCLib.o SnnsCLibGenericR_util.o SnnsCLibWrapper.o art_ui.o arttr_f.o bn_JordElm.o bn_art1.o bn_art2.o bn_artmap.o bn_assoz.o bn_kohonen.o cc_display.o cc_glob.o cc_learn.o cc_modify.o cc_prune.o dlvq_learn.o func_tbl.o init_f.o kernel.o kr_JordElm.o kr_amap.o kr_art.o kr_art1.o kr_art2.o kr_funcs.o kr_inversion.o kr_io.o kr_mem.o kr_newpattern.o kr_pat_parse.o kr_pat_scan.o kr_td.o kr_ui.o learn_f.o matrix.o prun_f.o remap_f.o scaled_conj_grad.o stochastic_learn_f.o tacoma_learn.o tbl_func.o trans_f.o u_lrand48.o update_f.o Welcome to Discover! -L/usr/lib64/R/lib -lR
Loading required package: discoverR
Loading required package: rJava
Loading required package: stringr
g++: Welcome: No such file or directory
g++: to: No such file or directory
g++: Discover!: No such file or directory
make: *** [RSNNS.so] Error 1
ERROR: compilation failed for package 'RSNNS' - removing '/root/rpmbuild/BUILDROOT/RSNNS-0.4-7.x86_64/usr/lib64/R/library/RSNNS'
from rsnns.
cbergmeir
commented on August 28, 2024
Hi,
Welcome to Discover! -L/usr/lib64/R/lib -lR Loading
required package: discoverR Loading required package: rJava Loading required package: stringr g++: Welcome: No such file or directory g++: to: No such file or directory g++: Discover!: No such file or directory make: *** [RSNNS.so] Error 1 ERROR: compilation failed for package ‘RSNNS’
This last part is a bit strange, RSNNS doesn't use neither discoveR not
rJava nor stringr. It seems to be a problem very specific to your setup.
If I run R CMD INSTALL it works just fine. I'm not so sure if I can help
with this.
Regards,
Christoph
On 11/09/2015 06:14 PM, lasoncheng wrote:
Thanks for reply. The detail information is as follows:
System info:2.6.32-358.el6.x86_64 #1
#1 SMP Fri Feb 22 00:31:26
UTC 2013 x86_64 x86_64 x86_64 GNU/Linux (centos6.5)
I use two ways to install RSNNS.(R CMD INSTALL RSNNS_0.4-7.tar.gz or
rpmbuild -ba RSNNS.spec )
logs:
- installing to library ‘/usr/lib/discover/discoverR/lib’
- installing /source/ package ‘RSNNS’ ... ** package ‘RSNNS’
successfully unpacked and MD5 sums checked ** libs g++
-I/usr/lib64/R/include -DNDEBUG -DR_USE_C99_IN_CXX
-I/usr/local/include -I"/usr/lib64/R/library/Rcpp/include" -fpic -g
-O2 -c SnnsCLib.cpp -o SnnsCLib.o gcc -std=gnu99
-I/usr/lib64/R/include -DNDEBUG -DR_USE_C99_IN_CXX
-I/usr/local/include -I"/usr/lib64/R/library/Rcpp/include" -fpic -g
-O2 -c SnnsCLibGenericR_util.c -o SnnsCLibGenericR_util.o g++
-I/usr/lib64/R/include -DNDEBUG -DR_USE_C99_IN_CXX
-I/usr/local/include -I"/usr/lib64/R/library/Rcpp/include" -fpic -g
-O2 -c SnnsCLibWrapper.cpp -o SnnsCLibWrapper.o g++
-I/usr/lib64/R/include -DNDEBUG -DR_USE_C99_IN_CXX
-I/usr/local/include -I"/usr/lib64/R/library/Rcpp/include" -fpic -g
-O2 -c art_ui.cpp -o art_ui.o g++ -I/usr/lib64/R/include -DNDEBUG
-DR_USE_C99_IN_CXX -I/usr/local/include
-I"/usr/lib64/R/library/Rcpp/include" -fpic -g -O2 -c arttr_f.cpp -o
arttr_f.o g++ -I/usr/lib64/R/include -DNDEBUG -DR_USE_C99_IN_CXX
-I/usr/local/include -I"/usr/lib64/R/library/Rcpp/include" -fpic -g
-O2 -c bn_JordElm.cpp -o bn_JordElm.o g++ -I/usr/lib64/R/include
-DNDEBUG -DR_USE_C99_IN_CXX -I/usr/local/include
-I"/usr/lib64/R/library/Rcpp/include" -fpic -g -O2 -c bn_art1.cpp -o
bn_art1.o g++ -I/usr/lib64/R/include -DNDEBUG -DR_USE_C99_IN_CXX
-I/usr/local/include -I"/usr/lib64/R/library/Rcpp/include" -fpic -g
-O2 -c bn_art2.cpp -o bn_art2.o g++ -I/usr/lib64/R/include -DNDEBUG
-DR_USE_C99_IN_CXX -I/usr/local/include
-I"/usr/lib64/R/library/Rcpp/include" -fpic -g -O2 -c bn_artmap.cpp
-o bn_artmap.o g++ -I/usr/lib64/R/include -DNDEBUG
-DR_USE_C99_IN_CXX -I/usr/local/include
-I"/usr/lib64/R/library/Rcpp/include" -fpic -g -O2 -c bn_assoz.cpp
-o bn_assoz.o g++ -I/usr/lib64/R/include -DNDEBUG -DR_USE_C99_IN_CXX
-I/usr/local/include -I"/usr/lib64/R/library/Rcpp/include" -fpic -g
-O2 -c bn_kohonen.cpp -o bn_kohonen.o g++ -I/usr/lib64/R/include
-DNDEBUG -DR_USE_C99_IN_CXX -I/usr/local/include
-I"/usr/lib64/R/library/Rcpp/include" -fpic -g -O2 -c cc_display.cpp
-o cc_display.o g++ -I/usr/lib64/R/include -DNDEBUG
-DR_USE_C99_IN_CXX -I/usr/local/include
-I"/usr/lib64/R/library/Rcpp/include" -fpic -g -O2 -c cc_glob.cpp -o
cc_glob.o g++ -I/usr/lib64/R/include -DNDEBUG -DR_USE_C99_IN_CXX
-I/usr/local/include -I"/usr/lib64/R/library/Rcpp/include" -fpic -g
-O2 -c cc_learn.cpp -o cc_learn.o g++ -I/usr/lib64/R/include
-DNDEBUG -DR_USE_C99_IN_CXX -I/usr/local/include
-I"/usr/lib64/R/library/Rcpp/include" -fpic -g -O2 -c cc_modify.cpp
-o cc_modify.o g++ -I/usr/lib64/R/include -DNDEBUG
-DR_USE_C99_IN_CXX -I/usr/local/include
-I"/usr/lib64/R/library/Rcpp/include" -fpic -g -O2 -c cc_prune.cpp
-o cc_prune.o g++ -I/usr/lib64/R/include -DNDEBUG -DR_USE_C99_IN_CXX
-I/usr/local/include -I"/usr/lib64/R/library/Rcpp/include" -fpic -g
-O2 -c dlvq_learn.cpp -o dlvq_learn.o g++ -I/usr/lib64/R/include
-DNDEBUG -DR_USE_C99_IN_CXX -I/usr/local/include
-I"/usr/lib64/R/library/Rcpp/include" -fpic -g -O2 -c func_tbl.cpp
-o func_tbl.o g++ -I/usr/lib64/R/include -DNDEBUG -DR_USE_C99_IN_CXX
-I/usr/local/include -I"/usr/lib64/R/library/Rcpp/include" -fpic -g
-O2 -c init_f.cpp -o init_f.o g++ -I/usr/lib64/R/include -DNDEBUG
-DR_USE_C99_IN_CXX -I/usr/local/include
-I"/usr/lib64/R/library/Rcpp/include" -fpic -g -O2 -c kernel.cpp -o
kernel.o g++ -I/usr/lib64/R/include -DNDEBUG -DR_USE_C99_IN_CXX
-I/usr/local/include -I"/usr/lib64/R/library/Rcpp/include" -fpic -g
-O2 -c kr_JordElm.cpp -o kr_JordElm.o g++ -I/usr/lib64/R/include
-DNDEBUG -DR_USE_C99_IN_CXX -I/usr/local/include
-I"/usr/lib64/R/library/Rcpp/include" -fpic -g -O2 -c kr_amap.cpp -o
kr_amap.o g++ -I/usr/lib64/R/include -DNDEBUG -DR_USE_C99_IN_CXX
-I/usr/local/include -I"/usr/lib64/R/library/Rcpp/include" -fpic -g
-O2 -c kr_art.cpp -o kr_art.o g++ -I/usr/lib64/R/include -DNDEBUG
-DR_USE_C99_IN_CXX -I/usr/local/include
-I"/usr/lib64/R/library/Rcpp/include" -fpic -g -O2 -c kr_art1.cpp -o
kr_art1.o g++ -I/usr/lib64/R/include -DNDEBUG -DR_USE_C99_IN_CXX
-I/usr/local/include -I"/usr/lib64/R/library/Rcpp/include" -fpic -g
-O2 -c kr_art2.cpp -o kr_art2.o g++ -I/usr/lib64/R/include -DNDEBUG
-DR_USE_C99_IN_CXX -I/usr/local/include
-I"/usr/lib64/R/library/Rcpp/include" -fpic -g -O2 -c kr_funcs.cpp
-o kr_funcs.o g++ -I/usr/lib64/R/include -DNDEBUG -DR_USE_C99_IN_CXX
-I/usr/local/include -I"/usr/lib64/R/library/Rcpp/include" -fpic -g
-O2 -c kr_inversion.cpp -o kr_inversion.o g++ -I/usr/lib64/R/include
-DNDEBUG -DR_USE_C99_IN_CXX -I/usr/local/include
-I"/usr/lib64/R/library/Rcpp/include" -fpic -g -O2 -c kr_io.cpp -o
kr_io.o g++ -I/usr/lib64/R/include -DNDEBUG -DR_USE_C99_IN_CXX
-I/usr/local/include -I"/usr/lib64/R/library/Rcpp/include" -fpic -g
-O2 -c kr_mem.cpp -o kr_mem.o g++ -I/usr/lib64/R/include -DNDEBUG
-DR_USE_C99_IN_CXX -I/usr/local/include
-I"/usr/lib64/R/library/Rcpp/include" -fpic -g -O2 -c
kr_newpattern.cpp -o kr_newpattern.o g++ -I/usr/lib64/R/include
-DNDEBUG -DR_USE_C99_IN_CXX -I/usr/local/include
-I"/usr/lib64/R/library/Rcpp/include" -fpic -g -O2 -c
kr_pat_parse.cpp -o kr_pat_parse.o g++ -I/usr/lib64/R/include
-DNDEBUG -DR_USE_C99_IN_CXX -I/usr/local/include
-I"/usr/lib64/R/library/Rcpp/include" -fpic -g -O2 -c
kr_pat_scan.cpp -o kr_pat_scan.o g++ -I/usr/lib64/R/include -DNDEBUG
-DR_USE_C99_IN_CXX -I/usr/local/include
-I"/usr/lib64/R/library/Rcpp/include" -fpic -g -O2 -c kr_td.cpp -o
kr_td.o g++ -I/usr/lib64/R/include -DNDEBUG -DR_USE_C99_IN_CXX
-I/usr/local/include -I"/usr/lib64/R/library/Rcpp/include" -fpic -g
-O2 -c kr_ui.cpp -o kr_ui.o g++ -I/usr/lib64/R/include -DNDEBUG
-DR_USE_C99_IN_CXX -I/usr/local/include
-I"/usr/lib64/R/library/Rcpp/include" -fpic -g -O2 -c learn_f.cpp -o
learn_f.o g++ -I/usr/lib64/R/include -DNDEBUG -DR_USE_C99_IN_CXX
-I/usr/local/include -I"/usr/lib64/R/library/Rcpp/include" -fpic -g
-O2 -c matrix.cpp -o matrix.o g++ -I/usr/lib64/R/include -DNDEBUG
-DR_USE_C99_IN_CXX -I/usr/local/include
-I"/usr/lib64/R/library/Rcpp/include" -fpic -g -O2 -c prun_f.cpp -o
prun_f.o g++ -I/usr/lib64/R/include -DNDEBUG -DR_USE_C99_IN_CXX
-I/usr/local/include -I"/usr/lib64/R/library/Rcpp/include" -fpic -g
-O2 -c remap_f.cpp -o remap_f.o g++ -I/usr/lib64/R/include -DNDEBUG
-DR_USE_C99_IN_CXX -I/usr/local/include
-I"/usr/lib64/R/library/Rcpp/include" -fpic -g -O2 -c
scaled_conj_grad.cpp -o scaled_conj_grad.o g++
-I/usr/lib64/R/include -DNDEBUG -DR_USE_C99_IN_CXX
-I/usr/local/include -I"/usr/lib64/R/library/Rcpp/include" -fpic -g
-O2 -c stochastic_learn_f.cpp -o stochastic_learn_f.o g++
-I/usr/lib64/R/include -DNDEBUG -DR_USE_C99_IN_CXX
-I/usr/local/include -I"/usr/lib64/R/library/Rcpp/include" -fpic -g
-O2 -c tacoma_learn.cpp -o tacoma_learn.o g++ -I/usr/lib64/R/include
-DNDEBUG -DR_USE_C99_IN_CXX -I/usr/local/include
-I"/usr/lib64/R/library/Rcpp/include" -fpic -g -O2 -c tbl_func.cpp
-o tbl_func.o g++ -I/usr/lib64/R/include -DNDEBUG -DR_USE_C99_IN_CXX
-I/usr/local/include -I"/usr/lib64/R/library/Rcpp/include" -fpic -g
-O2 -c trans_f.cpp -o trans_f.o g++ -I/usr/lib64/R/include -DNDEBUG
-DR_USE_C99_IN_CXX -I/usr/local/include
-I"/usr/lib64/R/library/Rcpp/include" -fpic -g -O2 -c u_lrand48.cpp
-o u_lrand48.o g++ -I/usr/lib64/R/include -DNDEBUG
-DR_USE_C99_IN_CXX -I/usr/local/include
-I"/usr/lib64/R/library/Rcpp/include" -fpic -g -O2 -c update_f.cpp
-o update_f.o Loading required package: discoverR Loading required
package: rJava Loading required package: stringr g++ -shared
-L/usr/lib64/R/lib -L/usr/local/lib64 -o RSNNS.so SnnsCLib.o
SnnsCLibGenericR_util.o SnnsCLibWrapper.o art_ui.o arttr_f.o
bn_JordElm.o bn_art1.o bn_art2.o bn_artmap.o bn_assoz.o bn_kohonen.o
cc_display.o cc_glob.o cc_learn.o cc_modify.o cc_prune.o
dlvq_learn.o func_tbl.o init_f.o kernel.o kr_JordElm.o kr_amap.o
kr_art.o kr_art1.o kr_art2.o kr_funcs.o kr_inversion.o kr_io.o
kr_mem.o kr_newpattern.o kr_pat_parse.o kr_pat_scan.o kr_td.o
kr_ui.o learn_f.o matrix.o prun_f.o remap_f.o scaled_conj_grad.o
stochastic_learn_f.o tacoma_learn.o tbl_func.o trans_f.o u_lrand48.o
update_f.o Welcome to Discover! -L/usr/lib64/R/lib -lR Loading
required package: discoverR Loading required package: rJava Loading
required package: stringr g++: Welcome: No such file or directory
g++: to: No such file or directory g++: Discover!: No such file or
directory make: *** [RSNNS.so] Error 1 ERROR: compilation failed for
package ‘RSNNS’- removing ‘/usr/lib/discover/discoverR/lib/RSNNS’
—
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#4 (comment).
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lasoncheng
commented on August 28, 2024
Thanks for your reminding and help! I solved it. It's my fault because I forget to update my conf file! Thanks for your fast reply again!
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