Comments (1)
Youguang
commented on June 26, 2024
After unnest AMR::antibiotics, it works now
antimicrobials <- antimicrobials %>%
mutate(ab_days = as.integer(ab_stop_date - ab_start_date),
ab_timing = as.integer(ab_start_date - adm_start_date),
ddd_per_prescription = ddd_per_day*ab_days) %>%
left_join(
AMR::antibiotics %>%
select(
atc_code = atc, ab_type = name, ab_group = atc_group2
) %>% unnest(atc_code), by = "atc_code") %>%
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