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500lines

500 Lines or Less

archive-datacarpentry

Data Carpentry workshop materials

awesome-public-datasets

An awesome list of high-quality datasets in public domains (on-going).

bika-lims

Web-based Laboratory Information Management System

caffo-coursera

A repository of my Coursera latex code and notes

capstone_nlp

NLP

cdr3

cellprofiler-analyst

Software for exploring and analyzing large, high-dimensional image-derived data.

community_software_tools_for_ngs

courses

Course materials for the Data Science Specialization: https://www.coursera.org/specialization/jhudatascience/1

data-analysis-and-machine-learning-projects

Repository of teaching materials, code, and data for my data analysis and machine learning projects.

dataproductassignment

datasharing

The Leek group guide to data sharing

dive-into-machine-learning

Dive into Machine Learning with Python Jupyter notebook and scikit-learn

eui-text-workshop

Methods workshop: Automated Text Analysis with R

exdata_plotting1

Plotting Assignment 1 for Exploratory Data Analysis

experiment-scripts

Automatically run experiments, upload results to google docs, analyze them using R, and include the analysis in LaTeX.

exploratory-data-project1

Project1 for Exploratory Data Analysis

findantibodies

A custom Python program to accompany Meyer et al. "A Simplified Workflow for Monoclonal Antibody Sequencing."

genomenote

Note for MIT Genome clase

genstats

Statistics course for JHU Genomic Data Science Sequence

go

The Open Source Data Science Masters

homebrew

:beer: The missing package manager for OS X.

labs

Scripts for PH525x: Data Analysis for Genomics

learn-python-the-hard-way

learndatascience

Open Content for self-directed learning in data science

learninglunches

Materials for a series of learning lunches on news development topics.

machinelearing

mining-the-social-web-2nd-edition

The official online compendium for Mining the Social Web, 2nd Edition (O'Reilly, 2013)

my-note

Note for my R code