charlesm93 Goto Github PK

amortized_vi

experiments on amortized VI

avi-when-and-why

Code to reproduce experiments in paper: "Amortized Variational Inference: When and Why?"

charlesm93.github.io

Github Pages template for academic personal websites, forked from mmistakes/minimal-mistakes

disease_transmission_workflow

Supplementary code for paper "Bayesian workflow for disease transmission model".

epiphanyrepository

example-models

Example models for Stan

gsm-vi

Code for Gaussian Score Matching Variational Inference

laplace_manuscript

Computer code used for the paper on HMC and the embedded Laplace approximation.

math

Stan Math Library

mixedsolver

Annex code for mixed solver paper.

ml_for_ocean_pco2_interpolation

Strengths and weaknesses of three Machine Learning methods for pCO2 interpolation

nested-rhat

Supplemental code for the paper on Nested $\widehat R$

ode-tuning

Experiment on switching ODE integrator between warmup phases of HMC sampling.

potts_simulation

Code for the paper "Simulating Ising and Potts models at critical and cold temperatures using auxiliary Gaussian variables."

presentations

Slides and notes I can share publicly.

stan

Stan development repository (home page is linked below). The master branch contains the current release. The develop branch contains the latest stable development. See the Developer Process Wiki for details.

stancon2020

Code for the talk "Approximate Bayesian inference for latent Gaussian models in Stan"

stantutorial

Files for StanCon 2023 tutorial.

variance-delinkage

Code to reproduce the figures in paper on the Shrinkage-Delinkage trade-off.

vi-ordering

Code to reproduce figures and results in paper: "An Ordering of divergences for variational inference with a factorized Gaussian approximation".