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kwabenantim avatar kwabenantim commented on September 24, 2024
SafetyError: The package for vtk located at /usr/local/pkgs/vtk-7.1.1-py310h1234567_0
appears to be corrupted. The path 'lib/cmake/vtk-7.1/VTKTargets.cmake'
has an incorrect size.
  reported size: 75648 bytes
  actual size: 71675 bytes

ClobberError: The package 'conda-forge/noarch::future-0.18.3-pyhd8ed1ab_0' cannot be installed due to a
path collision for 'bin/futurize'.
This path already exists in the target prefix, and it won't be removed
by an uninstall action in this transaction. The path is one that conda
doesn't recognize. It may have been created by another package manager.


ClobberError: The package 'conda-forge/noarch::future-0.18.3-pyhd8ed1ab_0' cannot be installed due to a
path collision for 'bin/pasteurize'.
This path already exists in the target prefix, and it won't be removed
by an uninstall action in this transaction. The path is one that conda
doesn't recognize. It may have been created by another package manager.


ClobberError: The package 'conda-forge/linux-64::numpy-1.24.3-py310ha4c1d20_0' cannot be installed due to a
path collision for 'bin/f2py'.
This path already exists in the target prefix, and it won't be removed
by an uninstall action in this transaction. The path is one that conda
doesn't recognize. It may have been created by another package manager.


ClobberError: The package 'conda-forge/linux-64::numpy-1.24.3-py310ha4c1d20_0' cannot be installed due to a
path collision for 'bin/f2py3'.
This path already exists in the target prefix, and it won't be removed
by an uninstall action in this transaction. The path is one that conda
doesn't recognize. It may have been created by another package manager.


ClobberError: The package 'conda-forge/linux-64::numpy-1.24.3-py310ha4c1d20_0' cannot be installed due to a
path collision for 'bin/f2py3.10'.
This path already exists in the target prefix, and it won't be removed
by an uninstall action in this transaction. The path is one that conda
doesn't recognize. It may have been created by another package manager.


ClobberError: The package 'conda-forge/linux-64::fonttools-4.39.4-py310h2372a71_0' cannot be installed due to a
path collision for 'bin/fonttools'.
This path already exists in the target prefix, and it won't be removed
by an uninstall action in this transaction. The path is one that conda
doesn't recognize. It may have been created by another package manager.


ClobberError: The package 'conda-forge/linux-64::fonttools-4.39.4-py310h2372a71_0' cannot be installed due to a
path collision for 'bin/pyftmerge'.
This path already exists in the target prefix, and it won't be removed
by an uninstall action in this transaction. The path is one that conda
doesn't recognize. It may have been created by another package manager.


ClobberError: The package 'conda-forge/linux-64::fonttools-4.39.4-py310h2372a71_0' cannot be installed due to a
path collision for 'bin/pyftsubset'.
This path already exists in the target prefix, and it won't be removed
by an uninstall action in this transaction. The path is one that conda
doesn't recognize. It may have been created by another package manager.


ClobberError: The package 'conda-forge/linux-64::fonttools-4.39.4-py310h2372a71_0' cannot be installed due to a
path collision for 'bin/ttx'.
This path already exists in the target prefix, and it won't be removed
by an uninstall action in this transaction. The path is one that conda
doesn't recognize. It may have been created by another package manager.


ClobberError: The package 'conda-forge/linux-64::fonttools-4.39.4-py310h2372a71_0' cannot be installed due to a
path collision for 'share/man/man1/ttx.1'.
This path already exists in the target prefix, and it won't be removed
by an uninstall action in this transaction. The path is one that conda
doesn't recognize. It may have been created by another package manager.


ClobberError: This transaction has incompatible packages due to a shared path.
  packages: conda-forge/linux-64::superlu-5.2.2-h00795ac_0, conda-forge/linux-64::superlu_dist-7.2.0-h25dcc4a_0
  path: 'include/superlu_enum_consts.h'


ClobberError: This transaction has incompatible packages due to a shared path.
  packages: conda-forge/linux-64::superlu-5.2.2-h00795ac_0, conda-forge/linux-64::superlu_dist-7.2.0-h25dcc4a_0
  path: 'include/supermatrix.h'


ClobberError: This transaction has incompatible packages due to a shared path.
  packages: conda-forge/linux-64::superlu_dist-7.2.0-h25dcc4a_0, conda-forge/linux-64::suitesparse-5.10.1-h9e50725_1
  path: 'include/colamd.h'

from pychaste.

kwabenantim avatar kwabenantim commented on September 24, 2024

This is solved by correcting the file sizes in info/paths.json in the custom vtk conda builds.

from pychaste.

kwabenantim avatar kwabenantim commented on September 24, 2024

The size change was due to post-processing to relax CMAKE_CXX_STD in the vtk's cmake, which is now done during build [2831892].

from pychaste.

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