Yen-Chung Chen's Projects
Recitation material for applied genomics (Spring 2021)
Modified AwesomeCV with automatic publication processing
Profile repo
Generate HCR-style Probe Pairs for mRNA visualization
An interface for exploring a couple of published NGS datasets
It draws an overview waveform graph and a summary boxplot of the wave amplitude. Both graphic is faceted by assay time point and sample type
Quick barplot (for n = 1) or stripchart with error bar for QPCR samples
Code accompanying Davis, Nern et al., 2018
Bayesian mixture modeling from Davis et al. (https://elifesciences.org/articles/50901) adapted to be a Snakemake pipeline
Rmarkdown source files for the website so we can manage the website with blogdown.
Source repo for a Hugo-generated personal site
A suite of population scale analysis tools for single-cell genomics data including implementation of Demuxlet / Freemuxlet methods and auxilary tools
Helper tools for popscle
Making word cloud from available abstracts from PubMed
Interactive visualization of binarized gene expression for combinatorial marker discovery
Plots That You Might Also Want With Seurat
A simple Snakemake profile for Slurm without --cluster-config
Source for splitgal4.org, a platform to share intersectional fly genetic resources.
Estimating the prevalence of the tested population and the sensitivity and specificity of the COVID test used in Taiwan
Scripts for recurring chores
React
Typescript
Django
Laravel
Facebook
Microsoft
Google
Alibaba
D3
Tencent