Comments (6)
moorepants
commented on August 29, 2024
This might be a long standing NumPy/setuptools bug: http://projects.scipy.org/numpy/ticket/860
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moorepants
commented on August 29, 2024
This says it was fixed: numpy/numpy#1458
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chrisdembia
commented on August 29, 2024
I had issues doing python setup.py install as well. I also had issues installing yaml; it was looking for a header file and thus was expecting that I had installed the yaml-dev package.
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moorepants
commented on August 29, 2024
I just started with new Ubuntu 13.04 and installed the build dependencies for NumPy. I then created a virtualenv the install worked perfectly for the base package and the doc extra.
$ sudo apt-get build-dep python-numpy
$ mkvirtualenv test
(test)$ pip install yeadon[doc]
Now the gui is another issue when in a virtualenv. It needs access to python-vtk which is a build and runtime dependency for MayaVi. So the following fails:
$ sudo apt-get build-dep mayav2
$ workon test
(test)$ pip install yeadon[gui]
Error is below the text.
I think there is a way to symlink the needed module in the virtualenv to your system install or you can use --system-site-packages on venv creation, but that sorta defeats the purpose of a venv.
I'm not sure how to get nose to install automatically as is. Maybe we need to add a explicit extra_requires for it too. It be nice to have a way to run the tests for the end user too. So after install they type something like:
$ yeadon --test
Error from MayaVi build in venv:
(test)$ pip install yeadon[gui]
Requirement already satisfied (use --upgrade to upgrade): yeadon[gui] in ./envs/test/lib/python2.7/site-packages
Installing extra requirements: 'gui'
Requirement already satisfied (use --upgrade to upgrade): numpy in ./envs/test/lib/python2.7/site-packages (from yeadon[gui])
Requirement already satisfied (use --upgrade to upgrade): pyyaml in ./envs/test/lib/python2.7/site-packages (from yeadon[gui])
Downloading/unpacking mayavi (from yeadon[gui])
Downloading mayavi-4.3.0.tar.gz (7.7MB): 7.7MB downloaded
Running setup.py egg_info for package mayavi
build_src
building extension "tvtk.array_ext" sources
building data_files sources
build_src: building npy-pkg config files
no previously-included directories found matching 'artwork'
no previously-included directories found matching 'docs/pdf'
Downloading/unpacking apptools (from mayavi->yeadon[gui])
Downloading apptools-4.2.0.tar.gz (275kB): 275kB downloaded
Running setup.py egg_info for package apptools
Downloading/unpacking traits (from mayavi->yeadon[gui])
Downloading traits-4.3.0.tar.gz (4.9MB): 4.9MB downloaded
Running setup.py egg_info for package traits
Downloading/unpacking traitsui (from mayavi->yeadon[gui])
Downloading traitsui-4.3.0.tar.gz (6.7MB): 6.7MB downloaded
Running setup.py egg_info for package traitsui
Downloading/unpacking configobj (from apptools->mayavi->yeadon[gui])
Downloading configobj-4.7.2.tar.gz
Running setup.py egg_info for package configobj
Downloading/unpacking pyface (from traitsui->mayavi->yeadon[gui])
Downloading pyface-4.3.0.tar.gz (5.1MB): 5.1MB downloaded
Running setup.py egg_info for package pyface
Installing collected packages: mayavi, apptools, traits, traitsui, configobj, pyface
Running setup.py install for mayavi
Traceback (most recent call last):
File "<string>", line 1, in <module>
File "/home/moorepants/envs/test/build/mayavi/setup.py", line 498, in <module>
**config
File "/home/moorepants/envs/test/local/lib/python2.7/site-packages/numpy/distutils/core.py", line 186, in setup
return old_setup(**new_attr)
File "/usr/lib/python2.7/distutils/core.py", line 152, in setup
dist.run_commands()
File "/usr/lib/python2.7/distutils/dist.py", line 953, in run_commands
self.run_command(cmd)
File "/usr/lib/python2.7/distutils/dist.py", line 972, in run_command
cmd_obj.run()
File "/home/moorepants/envs/test/local/lib/python2.7/site-packages/numpy/distutils/command/install.py", line 57, in run
r = self.setuptools_run()
File "/home/moorepants/envs/test/local/lib/python2.7/site-packages/numpy/distutils/command/install.py", line 31, in setuptools_run
return old_install_mod._install.run(self)
File "/usr/lib/python2.7/distutils/command/install.py", line 601, in run
self.run_command('build')
File "/usr/lib/python2.7/distutils/cmd.py", line 326, in run_command
self.distribution.run_command(command)
File "/usr/lib/python2.7/distutils/dist.py", line 972, in run_command
cmd_obj.run()
File "/home/moorepants/envs/test/build/mayavi/setup.py", line 303, in run
build_tvtk_classes_zip()
File "/home/moorepants/envs/test/build/mayavi/setup.py", line 290, in build_tvtk_classes_zip
gen_tvtk_classes_zip()
File "tvtk/setup.py", line 46, in gen_tvtk_classes_zip
from code_gen import TVTKGenerator
File "tvtk/code_gen.py", line 10, in <module>
import vtk
ImportError: No module named vtk
Complete output from command /home/moorepants/envs/test/bin/python -c "import setuptools;__file__='/home/moorepants/envs/test/build/mayavi/setup.py';exec(compile(open(__file__).read().replace('\r\n', '\n'), __file__, 'exec'))" install --record /tmp/pip-5EqW9q-record/install-record.txt --single-version-externally-managed --install-headers /home/moorepants/envs/test/include/site/python2.7:
running install
running build
Traceback (most recent call last):
File "<string>", line 1, in <module>
File "/home/moorepants/envs/test/build/mayavi/setup.py", line 498, in <module>
**config
File "/home/moorepants/envs/test/local/lib/python2.7/site-packages/numpy/distutils/core.py", line 186, in setup
return old_setup(**new_attr)
File "/usr/lib/python2.7/distutils/core.py", line 152, in setup
dist.run_commands()
File "/usr/lib/python2.7/distutils/dist.py", line 953, in run_commands
self.run_command(cmd)
File "/usr/lib/python2.7/distutils/dist.py", line 972, in run_command
cmd_obj.run()
File "/home/moorepants/envs/test/local/lib/python2.7/site-packages/numpy/distutils/command/install.py", line 57, in run
r = self.setuptools_run()
File "/home/moorepants/envs/test/local/lib/python2.7/site-packages/numpy/distutils/command/install.py", line 31, in setuptools_run
return old_install_mod._install.run(self)
File "/usr/lib/python2.7/distutils/command/install.py", line 601, in run
self.run_command('build')
File "/usr/lib/python2.7/distutils/cmd.py", line 326, in run_command
self.distribution.run_command(command)
File "/usr/lib/python2.7/distutils/dist.py", line 972, in run_command
cmd_obj.run()
File "/home/moorepants/envs/test/build/mayavi/setup.py", line 303, in run
build_tvtk_classes_zip()
File "/home/moorepants/envs/test/build/mayavi/setup.py", line 290, in build_tvtk_classes_zip
gen_tvtk_classes_zip()
File "tvtk/setup.py", line 46, in gen_tvtk_classes_zip
from code_gen import TVTKGenerator
File "tvtk/code_gen.py", line 10, in <module>
import vtk
ImportError: No module named vtk
----------------------------------------
Command /home/moorepants/envs/test/bin/python -c "import setuptools;__file__='/home/moorepants/envs/test/build/mayavi/setup.py';exec(compile(open(__file__).read().replace('\r\n', '\n'), __file__, 'exec'))" install --record /tmp/pip-5EqW9q-record/install-record.txt --single-version-externally-managed --install-headers /home/moorepants/envs/test/include/site/python2.7 failed with error code 1 in /home/moorepants/envs/test/build/mayavi
Storing complete log in /tmp/tmpJ_dxnh
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moorepants
commented on August 29, 2024
anaconda comes with mayavi (so does enthought's distribution). It's probably best to install from there. You may be able to get Mayavi running in a virtualenv by sym (or hard) linking to the system install.
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moorepants
commented on August 29, 2024
I'm going to close this. It works for basic install but will not work for the [gui] install because Mayavi is a pain to install with pip.
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Related Issues (20)
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