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Rui's Projects

bronchinet icon bronchinet

Airway segmentation from chest CTs using deep Convolutional Neural Networks

captk icon captk

Cancer Imaging Phenomics Toolkit (CaPTk) is a software platform to perform image analysis and predictive modeling tasks. Documentation: https://cbica.github.io/CaPTk/

deepmind-research icon deepmind-research

This repository contains implementations and illustrative code to accompany DeepMind publications

ev_gcn icon ev_gcn

Edge-variational Graph Convolutional Networks for Uncertainty-aware Disease Prediction

ild-cnn icon ild-cnn

This is supplementary material for the manuscript: "Lung Pattern Classification for Interstitial Lung Diseases Using a Deep Convolutional Neural Network" M. Anthimopoulos, S. Christodoulidis, L. Ebner, A. Christe and S. Mougiakakou, IEEE Transactions on Medical Imaging (2016)

kinetics-i3d icon kinetics-i3d

Convolutional neural network model for video classification trained on the Kinetics dataset.

lungtumormask icon lungtumormask

Automatic end-to-end lung tumor segmentation from CT images.

medicalnet icon medicalnet

Many studies have shown that the performance on deep learning is significantly affected by volume of training data. The MedicalNet project provides a series of 3D-ResNet pre-trained models and relative code.

medicalzoopytorch icon medicalzoopytorch

A pytorch-based deep learning framework for multi-modal 2D/3D medical image segmentation

midrc_dictionary icon midrc_dictionary

A data dictionary for the Medical Imaging Resource Data Commons (MIDRC).

privategpt icon privategpt

Interact privately with your documents using the power of GPT, 100% privately, no data leaks

simvascular icon simvascular

A comprehensive opensource software package providing a complete pipeline from medical image data segmentation to patient specific blood flow simulation and analysis.

vnet-tensorflow icon vnet-tensorflow

Implementation of vnet in tensorflow for medical image segmentation

vnet.pytorch icon vnet.pytorch

A PyTorch implementation for V-Net: Fully Convolutional Neural Networks for Volumetric Medical Image Segmentation

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