clatworthylab Goto Github PK
Name: Clatworthy Lab
Type: Organization
Bio: Professor Menna Clatworthy lab is focused on human tissue immunity. The lab houses the Cambridge Tissue Immunity Laboratory (C-TIL).
Twitter: clatworthylab
Name: Clatworthy Lab
Type: Organization
Bio: Professor Menna Clatworthy lab is focused on human tissue immunity. The lab houses the Cambridge Tissue Immunity Laboratory (C-TIL).
Twitter: clatworthylab
A single-cell package for Functional Annotation + gene Module Usage
Bulk BCR seq processing pipeline. Reimplementation of original package provided by Dr. Rachael Bashford-Rogers (Oxford)
Lab website for Clatworthy Lab using a minimalist Jekyll theme (Millenial)
Gene sets frequently used in Clatworthy lab.
scRNAseq analyses for SARS-CoV-2 infection (COVID-19)
Converting crams to fastq from irods
dandelion - A single cell BCR-seq analysis package for 10X Chromium 5' data
Analysis notebooks for scRNA-seq analysis of Formaldehyde-related TC-NER in mouse kidneys
Some tools for plotting single-cell data
Kelvin's python tool module
Notebooks used for analysis of LILACS scRNAseq.
Matt Coates
single-cell RNAseq analysis notebooks accompanying Tuong et al.
notebooks for the scrnaseq analysis to accompany Fitzpatrick 2023
Notebooks used for analysis of LILACS scRNAseq.
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