Caleb Ellington's Projects
Must-read papers on AI for Biology
A simple React-Django webapp to query DNA sequences against a databank of .fasta files
Antibody Cluster Analytics
A series of tutorials to introduce bioscience students to a variety of python-based research applications. UW Bioengineering 2019-2020 honors project
Birth-death models for modeling evolution in finite populations
Modeling cancer evolution from spatial transcriptomics data
Graduate Machine Learning Final Project, by Caleb Ellington, Daniel Jeong, and Anush Devadhasan
A beautiful, simple, clean, and responsive Jekyll theme for academics
Adapting protein language models and contrastive learning for highly-accurate drug-target interaction prediction.
An SKLearn-style toolbox for estimating and analyzing models, distributions, and functions with context-specific parameters.
NO-TEARS as loss for multimodal Contextual Estimation Network
A fun Wordle clone made using React, Typescript, and Tailwind, for Dad on Father's Day 2023
A wrapper for the prompt-debug-plot workflow of data science with GPT
scripts to experiment with Spotify's API for personal projects
A guest-list and digital risk management software for UW events
Farkle strategies to take the fun out of everything
Kmeans clustering and simple consensus motif finding for finding k-mer motifs in arbitrary sequence data
⚡ Building applications with LLMs through composability ⚡
Birthday gift for Steve Li, a script that gives you a little wisdom or motivation whenever you need it.
Competitive minesweeper
The best card you never have to play
Reimplementation of NOTEARS in Tensorflow
Quantitative trait loci analysis CLI and EM-based haplotyping CLI
Script that automatically opens UW registration when classes are available
Bayesian network selector for gene regulatory data
A second attempt. Now with Lizards!
React
Typescript
Django
Laravel
Facebook
Microsoft
Google
Alibaba
D3
Tencent