coaxecva Goto Github PK
Name: Quang Tran
Type: User
Company: St. Jude Children's Research Hospital
Bio: Sometimes the day... Just... Ends...
Name: Quang Tran
Type: User
Company: St. Jude Children's Research Hospital
Bio: Sometimes the day... Just... Ends...
Bioinformatics utilities mostly written in Perl.
block sampling using modal values
LSA 16SrRNA whole genome
the course introduces fundamental algorithms design techniques such as divide and conquer, dynamic programming, greedy. Prerequisite: COMP 2700
[University of Memphis] Review of the relational model; query processing and optimization; physical database design and tuning; transaction processing; concurrency control; crash recovery; database buffer management; database security.
The aim of this course is to introduce students to tools and techniques in all stages of the data science pipeline including, pre-processing, storage, visualization and analysis, in a domain-independent manner. The emphasis will be more on the practical aspects of data science. At the end of this course, students are expected to have the basic skills needed to start working in applications involving data science.
Algorithms for problems arising in molecular biology, such as sequence matching, alignment, gene finding, sequence assembly, phylogeny, and structure prediction; internet resources; statistical analysis of DNA, RNA, and protein sequences
Covers algorithms problems, techniques, and design emphasizing problem solving and implementation skills; topics include advanced data structures, graph algorithms, string matching, network flow, dynamic programming, and randomized algorithms.
An introduction to machine learning: hypothesis spaces, formation and evaluation; concept learning, decision trees, linear regression and perceptrons; graphical models (naive Bayes, Bayes Nets, Hidden Markov Models); computational learning theory; Support Vector Machines; instance-based learning
Computational aspects, algorithms, and techniques for human language processing; topics include lexical analysis, syntactic parsing, semantics, word sense disambiguation, logic forms, dialog, and pragmatics; applications include question answering and information extraction among others. PREREQUISITES: COMP 6040 or 6041 or permission of instructor.
Dr. Vinhthuy Phan (instructor)
Fix to run with python3, originally from https://rocaplab.ocean.washington.edu/tools/genbank_to_fasta/
Goal: get familiar with genome assemblers, pre-processing, reporting and validation.
a simple graph module
linear space LCS
Analysis of optimal alignments unfolds bias in existing variant profiles (BMC Bioinformatics 2016)
By Richard Monson-Haefel
LZ76 LZ78 Kolmogorov Complexity
LongAGE: a memory-efficient implementation of Alignment with Gap Excision (AGE)
rcfmi, polyster, sudo-alignment
Compute Shannon entropy at length k for a genome (.fasta/.fa)
Arrange student seats in class for a test/exam
for testing exe commit purposes
Integrated Adaptive Resilient
Using 16S rRNA Genes as Markers to Detect Unknown Bacteria in Microbial Communities (BMC Bioinformatics 2017)
*12-1pm: Introduction to RStudio/R, Reading Data into R *1-2pm: Various data visualizations in R *2-3pm: Basic Statistical Analysis in R *3-3:45pm: Shiny Application Demo – Identifying Interaction Effects in Large Data Sets (shinyfsa.org) *3:45-5pm: Creation of a Shiny Application
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.