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ac

A lossless compression tool for Amino Acid sequences

ac2

An efficient amino acid sequence compressor using Neural Networks

alcor

Alignment-free simulation, computation, and visualization of Low-compexity regions in biological data

altair

AltaiR: a C toolkit for alignment-free and temporal analysis of multi-FASTA data

cassavagenome

How compressible is a Cassava genome sequence?

chester

A memory efficient tool to map and visualize evolutionary regions

cobilab.github.io

Cobilab website

cpm-fcm

An encoder for biological sequences using Copy Models and Finite-context models

cryfa

A secure encryption tool for genomic data

eagle

An ultra-fast tool to find relative absent words in genomic data

evo

Evolutionary patterns in SARS-CoV-2 genomes

falcon

A tool to infer metagenomic sample composition

fasta-analysis

Sorting of DNA sequences within a Multi-Fasta file

fruit

Fast Relative Uniqueness fInder for proTein sequences

geco

A tool for compression and analysis of DNA sequences

geco2

An improved compression tool for DNA sequences

geco3

An efficient DNA sequence compressor using Neural Networks

gto

A genomics-proteomics toolkit

humangenome

How compressible is a human genome sequence?

jarvis

Efficient lossless compression of genomic sequences

jarvis2

Efficient DNA sequence compression

jarvis3

Efficient compression of biological data

magnet

An ultra-fast and high-sensitive tool to filter specific DNA content

mizar

A sorting method for encoding metagenomic data

nn-expert-mixer

oawk

rfsc

Reference-Free Sequence Classification Tool for DNA sequences in metagenomic samples

smash

A tool to find and visualize rearrangements in DNA sequences

smashpp

Find and visualize rearrangements in DNA sequences

spark

This program schools, simulates, and searches for exact or approximate Turing Machines (TMs) with specific characteristics.