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antsome

A sharing knowledge database for Ants

assembler-components

Components of genome sequence assembly tools

bamsnap-lrs

A modified version of Bamsnap with Long Read Support (LRS)

bioinformatics-cook

Perl/Python/R scripts for bioinformatics analysis

chicken-t2t

Scripts that used in our chicken T2T manuscript.

comery.github.io

data-visulization

issues for semina "Data Visulization"

enver-workshop-2021

生物信息学入门的系列课程，包括Linux, shell, Python 编程，建库测序，基因组学，以及系统进化，常用软件使用等内容。

for_soptted_hyena_genome

Some customized scripts for paper "A draft genome assembly of spotted hyena, Crocuta crocuta"

hifi-barcode-hiseq

A housed python program to analyze NGS data for HIFI-barcode project

hifi-barcode-pacbio

A set of tootkit for dealing with COI amplicons using Pacbio sequencing platform

hifi-barcode-se400

A new approach to access COI barcode using high throughput Single-End 400 bp sequencing

linkview

DNA序列比对结果 可视化展示工具

marmoset

mitoz

MitoZ: A toolkit for assembly, annotation, and visualization of animal mitochondrial genomes

mitoz-hackathon

This is a fork version from MitoZ which is developed by Guanliang Meng, and for a Hackathon activity.

nile_rat

scripts for nile rat genome study

novel_sequence

Novel sequence detection pipelines for individual genome from sequencing data or assembly.

phaser

phasing and Allele Specific Expression from RNA-seq

sjm

slurm job monitoring script

trio_chicken

scripts for paper "Evolutionary analysis of a complete chicken genome"

triogenetics

twoassemblersdance

Ref-based tool that can combine two assembler output to generate best assembly version