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COVID-19 Causal Reasoning's Projects

analysis icon analysis

Simple analyses and tutorials on the COVID-19 Knowledge Graph

bel2pyro icon bel2pyro

Graphical model implementation for doing causal inference on networks represented by BEL statements

bel4corona icon bel4corona

Code, notebooks, and resources for exploring and analyzing mechanistic knowledge graphs about 'rona

bio2bel icon bio2bel

A Python framework for integrating biological databases and structured data sources in Biological Expression Language (BEL)

biohacker icon biohacker

debugging biological networks to reach coherence, completeness and consistency

carnival icon carnival

CAusal Reasoning for Network Identification with integer VALue programming in R

causaleffect icon causaleffect

:exclamation: This is a read-only mirror of the CRAN R package repository. causaleffect — Deriving Expressions of Joint Interventional Distributions and Transport Formulas in Causal Models

covid-19 icon covid-19

A collection of work related to COVID-19

covid19kg icon covid19kg

COVID-19 Knowledge Graph: a computable, multi-modal, cause-and-effect knowledge model of COVID-19 pathophysiology

hbec_sars-cov-2_scrna-seq icon hbec_sars-cov-2_scrna-seq

Supplementary data for "Single-cell longitudinal analysis of SARS-CoV-2 infection in human bronchial epithelial cells"

hetionet-bel icon hetionet-bel

A BEL export of Hetionet (https://github.com/hetio/hetionet)

notears icon notears

DAGs with NO TEARS: Continuous Optimization for Structure Learning

pybel icon pybel

A pure Python package for parsing, validating, compiling, and converting biological knowledge graphs encoded in BEL

pyro_cg icon pyro_cg

A package for creating causal graphs in pyro

synapse-demo icon synapse-demo

What will hopefully be a set of quick and easy demonstrations of using the synapse clients to analyze data.

task-vt icon task-vt

"What do we know about vaccines and therapeutics?"

whynot icon whynot

A Python sandbox for decision making in dynamics

y0 icon y0

Implementation of ID, IDC, ID* and IDC*

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