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bmsc-ga-4493-spring2022

BMSC-GA 4493 Deep Learning in Medicine - Spring 2022

clara-train-examples

Example notebooks demonstrating how to use Clara Train to build Medical Imaging Deep Learning models

federatedlearning_oct_bmi

Federated Learning for Ophthalmic Imaging using NVFlare. Performed for NYU Biomedical Informatics MS final thesis.

git_example

jimric-processingsoftwares

Collection of software packages installed in the JIMRIC

medmnist

18 MNIST-like Datasets for 2D and 3D Biomedical Image Classification: pip install medmnist

octclassificationcomparison

This is the associated code base for our paper titled, "Comparing Performance of CNN and ViT Models in Retinal OCT Image Classification Task" as part of our final project for the course BMSC-GA 4493 Deep Learning in Medicine - Spring 2022.

rvilcekmasters2021

This is the course site for 2021's Vilcek BMIN-GA 1005 Programming for Data Analysis. Here you will find class materials, including markdown files, HTML slides and breakout room assignments. You will also be assigned a GitHub page to submit your assignments to.

spinalcordinjury-ml