Justin Payne's Projects
Efficient Estimation of Evolutionary Distances
ASMNGS18 - 2018 Conference Details
Avro record class and reader generator
balenaCloud app for HomeBridge
A distributed workflow/job app for Django.
Beryl - bioinformatics database manager
Cookiecutter template for a simple Python project.
BLAST as an API-driven web service, because Torsten basically dared me to
Automatically exported from code.google.com/p/bootsie
GalaxyTrakr implementation of CDC's Lyve-SET
A tool to circularize genome assemblies
Template Repository for making new cookiecutter templates.
Inkscape extension for the layout of sheets of cards, tiles, or counters for boardgames.
Info and miscellaneous about me.
Code Safety Inspection Service
A Nextflow pipeline for fast and accurate SNP distance estimation from WGS read data or genome assemblies
CFSAN DAG-Core
This is a Cookiecutter template for developing an electronic device - it includes a workflow for PCB development using KiCad or Circuitmaker and 3D printable enclosure development using OpenSCAD and NopSCADLib.
A semi-automated assembly pipeline for MiSeq and IonTorrent FASTQ data. Supports modular, parameterized trimming operations and multi-strategy assembly comparison using QUAST.
A GitHub template for you to create your own repository for collaborative DnD 5e content.
A more dynamic camera for World of Warcraft. Forked for personal config
In silico prediction of E. coli serotype
Toy program to find the minimum set cover.
An AQI and weather-sensing station based on Homebridge and a Pi Zero.
JIFSAN training materials
I intend to wrap this up in proper packaging and a more featured CLI.
The second version of the Kraken taxonomic sequence classification system