Name: Computational Structural Biology - Karaca Lab
Type: User
Company: Izmir Biomedicine and Genome Center
Bio: We are interested in developing tools towards understanding the structure-dynamics-function relationships of biomolecules.
Location: Izmir, Turkey
Blog: https://www.ibg.edu.tr/research-programs/groups/karaca-lab/
afanalysis
Quick analysis for AlphaFold models
bindkin
A structural benchmark to measure point mutations’ impact on kinase-ligand interactions
bulasiciligi-arttiran-koronavirus-sars-cov-2-mutasyonlarinin-tahmini
casp15_assembly
Data and analysis scripts of the CASP15 assembly category
chem101.6
csb-ws
This page is prepared to model the complex of phage G3P and E. Coli TolA
dnmt3ab_specificity
an interaction dynamics framework (IDF) applied on DNMT3A/B systems
eif2g-eif2bg-ints
The modeling of eif2g-eif2bg interactions
gmx_corr
gmx_corr converts the covariance matrix which is produced by GROMACS covar to cross correlation matrix and creates a heat map figure.
gmx_performance_on_hpc
Gromacs performance benchmarking on different HPC platforms
haddocking.github.io
Webpage of the Bonvinlab @ Utrecht University and HADDOCK software
interaction-analysis
kdm6a-interacting-models
Contains the structural models of KDM6A, TLE1, HES1, RUNX1-2, HHEX interactions
nucdnadynamics
Nucleosomal DNA Dynamics
paralog_sdp
Predicting the Specificity-Determining Positions of Paralogous Complexes
prot-on
This repo contains the collection of codes to find designer interfacial mutations
rbd-ace2-mutbench
Benchmarking the structure-based mutation predictors on ace2-rbd binding data set
recursivermscheck
It calculates the pairwise RMSD values of available pdb files in the folder recursively.
sox-ptf
React
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
Typescript
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
Django
The Web framework for perfectionists with deadlines.
Laravel
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
Facebook
We are working to build community through open source technology. NB: members must have two-factor auth.
Microsoft
Open source projects and samples from Microsoft.
Google
Google ❤️ Open Source for everyone.
Alibaba
Alibaba Open Source for everyone
D3
Data-Driven Documents codes.
Tencent
China tencent open source team.
