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Simona Cristea photo

csimona Goto Github PK

followers: 6.0 following: 0.0 repos: 5.0 gists: 0.0

Name: Simona Cristea

Type: User

Company: Dana-Farber Cancer Institute & Harvard Medical School

Bio: Cancer Data Scientist | Cracking the mysterious 🧬 code with 🧮 & 💻 | My journey: 🇷🇴🇸🇪🇨🇭🇺🇸 | My life advice: always say YES to 🇨🇭🍫

Twitter: simocristea

Location: Boston, USA & Zurich, Switzerland

Simona Cristea's Projects

pathtimex icon pathtimex

pathTiMEx is a model for the joint inference of mutually exclusive pathways and the dependencies among them in carcinogenesis

timex icon timex

Bioconductor package for finding mutually exclusive groups of alterations in large cancer datasets

tnbc_scrnaseq icon tnbc_scrnaseq

Code and data materials for the paper "Unravelling subclonal heterogeneity and aggressive disease states in TNBC through single-cell RNA-seq", by Karaayvaz*, Cristea* et al, Nat Comm (2018).

tumor-prevention-rat-scrnaseq icon tumor-prevention-rat-scrnaseq

Code and materials to support genomic analyses and reproduce results from the paper "Breast cancer prevention by short-term inhibition of TGFB signaling", published in Nature Communications in December 2022.

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