Related Issues (20)
- add check to ensure there is "label" in infile before use of plots.py
- Describe custom.py
- make it so that custom.py works without correlation feature enabled
- make it so that promi2 also generate plots
- if distance is NA ... raise error ... bad position
- add cumulative plots
- BUG: gff_unify is not unify based on miRNA position for mprox & corr
- add verify no chrM in custom.py
- Value/Unpack error in custom.py caused by tc_quantify
- add per miRNA cumulative plot
- remove plot "All TSS−[miRNA,NA] pair" from plot.py
- make it so that if TSS is not within 50kb of miRNA, prediction will be background
- x-axis label are covered in per miRNA plots
- Described label.py HOT 1
- features.gff generated by custom.py is not unique HOT 1
- Add more info about correlation
- custom.py: use max counts (current setup) or try all counts per positoin?
- Fix training.py so creation of training set does not depend on sets of infiles ...?
- make sure directory does not exist for create-training-set.py
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