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Darren Wilkinson's Projects

blog icon blog

Code samples associated with my blog posts

breeze icon breeze

Breeze is a numerical processing library for Scala.

bwk icon bwk

Code from Boys, Wilkinson and Kirkwood (2008)

djwhacks icon djwhacks

Test repo for sharing code snippets and learning about git

dsmts icon dsmts

Discrete stochastic models test suite

fp-ssc-course icon fp-ssc-course

An introduction to functional programming for scalable statistical computing

fpnem-2017-03 icon fpnem-2017-03

FP North East meetup: Hands-on introduction to Apache Spark

fpnem-2020-07 icon fpnem-2020-07

Materials for "An evening of Scala" at the FPNE Meetup for July 2020

fps-course icon fps-course

Category theory for pure functional programming in Scala - materials for course participants

fps.g8 icon fps.g8

Sbt giter8 template for functional programming in Scala with Cats and other Typelevel libraries

gdagsim icon gdagsim

GDAGsim - library for (conditional) simulation of Gaussian DAG models

isba2021 icon isba2021

Material relating to my ISBA 2021 presentation

logreg icon logreg

Bayesian inference for a logistic regression model in various languages

metagenomics icon metagenomics

Materials for my taxa abundance/metagenomics hands-on training session

mgnifyr icon mgnifyr

R package for searching, downloading and analysis of EBI MGnify metagenomics data

milewski-ctfp-pdf icon milewski-ctfp-pdf

Bartosz Milewski's 'Category Theory for Programmers' unofficial PDF and LaTeX source

monte-scala icon monte-scala

Tools for the development of Monte Carlo algorithms in Scala

python-smfsb icon python-smfsb

Python library for the book, Stochastic modelling for systems biology, third edition

sbml-sh icon sbml-sh

SBML-shorthand - a concise notation for Systems Biology models targeting SBML

scala-course icon scala-course

Scala for Statistical Computing and Data Science Short Course

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