Comments (5)
Hi @taylorreiter, thanks for the heads up. The Ecology spreadsheets lesson hasn't been updated yet, and These changes will need to be incorporated into Ecology Spreadsheets, Nonetheless, if you want to put in a PR for this, and for #81 it would be great.
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Hi @hoytpr! I'm not sure what you mean by the Ecology spreadsheet lesson/incorporating to the Ecology spreadsheets. Would you be willing to clarify a bit?
Also, I'm teaching this workshop today with @svigneau...we'll be putting in some more issues for things we notice along the way!
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@taylorreiter
https://datacarpentry.org/spreadsheet-ecology-lesson/
This lesson might be becoming/already obsolete. Nobody tells me anything. :-)
from organization-genomics.
Ah! Ok. I'm referencing this exercise:
This is some potential spreadsheet data generated about a sequencing experiment.
With the person next to you, for about 2 minutes, discuss some of the problems with the
spreadsheet data shown above. You can look at the image, or download the file to you
computer via the link and open it in a spreadsheet reader like Excel.
We updated the png to a new dataset yesterday. The new messy spreadsheet matches the new dataset that is used in the wrangling-genomics
episode, and which was approved by the CAC (see datacarpentry/wrangling-genomics#133).
I missed adding a link to download what is shown in the png to the local computer. Additionally, the wrong cleaned data sheet is currently linked. The clean data sheet is here: https://github.com/datacarpentry/wrangling-genomics/blob/gh-pages/files/Ecoli_metadata_composite.tsv.
This is separate from the Ecology lesson.
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Thanks @taylorreiter I'm just gonna close the issue #80
from organization-genomics.
Related Issues (20)
- Typo in the common problems section HOT 4
- Combine Data Tidiness and Planning for NGS HOT 1
- Combine (and reduce) the SRA Lesson HOT 3
- clarification HOT 1
- Lesson 3 REL4541B instructions no longer work as-written HOT 1
- topic for the repository HOT 1
- Ep1 Data Tidyness Metadata Example HOT 1
- Locate the Run Selector Table for the Lenski Dataset on the SRA does not work with IE HOT 2
- _episodes/03-ncbi-sra.md NCBI SRA dowload workflow error HOT 4
- SraRunTable.txt downloads as CSV, not TSV HOT 2
- Ask about learners' science in data tidiness first discussion? HOT 3
- Some issues https://datacarpentry.org/organization-genomics/02-project-planning/index.html HOT 1
- Need jump lists (anchors) for headings HOT 1
- Standardise heading levels
- Data tidiness file download issue HOT 3
- Updates required in ‘Examining Data on the NCBI SRA Database’ HOT 2
- Suggestion for page: Project Organization and Management for Genomics: Data HOT 2
- Scheduling early transition to Workbench HOT 2
- Transition To Workbench in May HOT 25
- Links need to be fixed in CONTRIBUTING.md HOT 6
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