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Name: David DeTomaso
Type: User
Bio: Computational Biologist
Name: David DeTomaso
Type: User
Bio: Computational Biologist
List of software packages for single-cell data analysis, including RNA-seq, ATAC-seq, etc.
Short Introduction to using EC2 on AWS
The Hacker Within at the University of California - Berkeley
Tutorial on Data Manipulation in Python
My config files
Python scripts to find enrichment of GO terms
Python library for scraping Google Scholar
A Jekyll template (based on holman/left) for a group that has regularly scheduled meetings, one post per date. Genericized from thehackerwithin/template
Analysis scripts for writing the Hotspot paper
Library for some bioinformatics data-manipulation
Install Python packages as stand-alone applications using Miniconda
Final project code for CS 294
Python interface to access reference genome features (such as genes, transcripts, and exons) from Ensembl
RSEM: accurate quantification of gene and isoform expression from RNA-Seq data
scikit-learn: machine learning in Python
A Python implementation of of the scTransform method
Deep generative modeling for single-cell transcriptomics
Statistical data visualization using matplotlib
A short tutorial on getting started with Snakemake for workflow management
A template for a fully-functioning sphinx deployment
Testing Git LFS
Work for THG Lab
Tutorial on plotting in Python
Various Python Tutorials and Talks
A two-way integration between Vim and IPython 0.11+
A webserver + database for Yosef Group samples
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.