diddrog11 Goto Github PK

academic-website

academic_distill

This is my new personal website. I migrated from HuGo to allow me to directly incorporate rmd files.

arenavirus_hantavirus

A repository to consolidate published research on Areanviruses and Hantaviruses in rodents.

arenavirus_hantavirus_app

An RShiny application to explore, subset and download the data extracted as part of the arenavirus_hantavirus project.

case_control

Case control study code, no individual identifiable data is included in this repository.

chapter_3

Planned analysis for chapter 3: Rodent trapping to explore rodent assemblage structure in Eastern Sierra Leone.

chapter_4

chapter_5

This repository will accompany the final chapter of my thesis

chicken_trading

data_for_gbif

This repository is to clean and organise the data from a paper published on rodent trapping across West Africa.

data_for_pharos

Format rodent trapping and serology data for inclusion into Pharos

davidspack

embarcadero

🌲🌉 Species distribution models with Bayesian additive regression trees

extended_rodent_trapping

This contains the analysis that was previously included in the rodent_trapping repository but has since been reduced to only cleaning.

habitatmapping

Code and data repository for creating a habitat type map

lassa_diagnostics

lassa_epi

Lassa virus epidemiology project

lassa_modelling

Chapter 5

lassa_phylogeography

LASV from NCBI and analysis of epitopes

lassa_risk

A systematic review and meta-analysis of risk factors associated with exposure, infection and disease for Lassa fever

lassa_sero

lassa_time_to_diagnosis

A review of cases to estimate time to diagnosis for Lassa fever

lassa_underreporting

A brief analysis to understand the expected number of Lassa fever cases derived from mortality data.

mastomys_distribution

Species distribution modelling for Mastomys natalensis

mgcv-esa-2018

ons_covid_smoking

ost_r_assessment

phd_project

ppr

Repository for PPR assay systematic review

robotoolbox

An R Client for the KoBoToolbox API v2 - https://dickoa.gitlab.io/robotoolbox/