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David Astling's Projects

aga_course_exome-seq icon aga_course_exome-seq

Exome-seq lecture for the Advanced Genome Analysis Course at the University of Colorado (HMGP7620)

aga_course_rna-seq icon aga_course_rna-seq

RNA-seq lecture for the Advanced Genome Analysis Course at the University of Colorado (HMGP7620)

amazon_ec2 icon amazon_ec2

A tutorial on setting up an Amazon EC2 instance presented at the Denver R Users Meetup Group on June 18, 2013

dplyr icon dplyr

dplyr: A grammar of data manipulation

duf1220_simulation icon duf1220_simulation

Whole genome sequence simulation of DUF1220 domains and testing of alignment strategies

facebase_cnv icon facebase_cnv

Copy Number Variation (CNV) analysis of SNP array data for the Facebase project.

plethora icon plethora

Copy number estimation of highly duplicated sequences

rsample icon rsample

Classes and functions to create and summarize different types of resampling objects

valr icon valr

Genome interval arithmetic in R

yardstick icon yardstick

Tidy methods for measuring model performance

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