Name: Dragonmasterx87
Type: User
Company: Tulane University
Bio: PhD in Molecular Cell. & Developmental Biology, UM.
Location: New Orleans, USA
Blog: https://fahdqadir.phd.sh/
Dragonmasterx87's Projects
Scripts for analyzing data from manuscript under revisions
Building on material from Introduction to Single Cell RNA-Seq, this workshop aims to cover advanced topics, including TCR and trajectory analysis. Instruction in introductory analysis will not be provided.
List of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.
A collection of resources for learning about tools and languages related to Bioinformatics
inferring cell-cell communication from scRNA-seq of ligand-receptor
Simple implementation of different single cell RNA-seq methods
Generate the UMI count matrix from CEL-Seq2 sequencing data
http://www.bioinformatics-made-simple.com/2018/04/how-to-make-heatmap-with-multiple.html
The Leek group guide to data sharing
R package for detecting doublets in single-cell RNA sequencing data
Easy single cell analysis platform for enrichment
Download FASTQ files from SRA or ENA repositories.
Venn Diagram by ggplot2, with really easy-to-use API.
:zap: Dynamically generated stats for your github readmes
This repository contains R code, with which you can create 3D UMAP and tSNE plots of Seurat analyzed scRNAseq data
Intro to ChIPseq using HPC