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awesome-single-cell

List of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.

bead-normalization

bead-based normalization of mass cytometry data

comut

daily_fudan

一键平安复旦小脚本，自动化快速上报疫情

firebrowser

An R client for broads firehose pipeline, providing TCGA data sets

flow-analysis-tutorial

A tutorial for the analysis of high-dimensional flow cytometry data

gene

glioma

glassx

GLASS consortium

hegemon

Exploring bioinformatics datasets

idep

Integrated Differential Expression and Pathway analysis

ifnar_epigenome

Processing and analysis scripts for Xu Qiu manuscript

immunedeconv

A unified interface to immune deconvolution methods (CIBERSORT, EPIC, quanTIseq, TIMER, xCell, MCPcounter)

immunophenogram

in-depth-ngs-data-analysis-course

Materials for 12-day course on analyzing RNA-Seq, ChIP-Seq and variant calling data.

learnbioconductor

Training material for introductory R / Bioconductor courses

ngs-pipeline

By study this, it won't be costly or time-consuming to customize a NGS data analysis pipeline

pafd-automated

pycaptcha

🛠 Pytorch lightweight Captcha Solver, Over 96% accuracy

python-100-days

Python - 100天从新手到大师

scseqr

This package has migrated to https://github.com/rezakj/iCellR please use iCellR instead of scSeqR for more functionalities and updates.

sigma

Mutational signature analysis for low statistics SNV data

tcga_example

vision

Signature Analysis and Visualization for Single-Cell RNA-seq