Comments (7)
Should be done using central repository rather than diverging
See my comments here:
OBOFoundry/OBOFoundry.github.io#16 (comment)
We can tag editions in the yaml with use-in-proper-owl-aware-browser or something like that
But I think really we should back up and think more carefully about the optimal solution for OLS. The import modules satisfy a compromise of different requirements, including those that tend to keep them minimal (avoid bloated RDF/XML files with big diffs, big I/O penalty when loading without catalog etc). These requirements are not really stated in any one place. The requirements for OLS may be different. It can be confusing for people when they end up browsing within an import modules in a web ontology browser. It might be nice to see an overlay with the full ontology. Another option would be to swap the import module with the full ontology, but this may be problematic in some cases (e.g. different versions may not make sense).
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In this particular case, perhaps the solution is for the official go.owl to be fully axiomatized
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It can be confusing for people when they end up browsing within an import modules in a web ontology browser.
This is already an issue:
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Who currently uses go-plus? [question from editors call]
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In this particular case, perhaps the solution is for the official go.owl to be fully axiomatized.
I think it is safer to keep go.owl to the subset of relations that we are happy are safe to use for grouping annotations via the graph.
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Who currently uses go-plus? [question from editors call]
Probably very few people, but I suspect that few people know about it. Perhaps many more would use it if they were able to explore it easily.
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We can put it in if you want. As David said GO terms already appear in multiple ontologies so it might already be confusing. We can think about better ways of displaying this. We already map terms to their "local" or defining ontology. This is currently used for ranking search results to make sure GO is the top hit when you search for a GO term.
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Related Issues (20)
- Index of pride ontology in OLS HOT 2
- New SWO location for OWL file HOT 2
- Help with configuring ontologies to support synonyms in OLS HOT 10
- search does not find rdfs:label values with language tags other than "en" HOT 6
- ontology_status in ols-config.yml is ignored HOT 2
- search ignores properties that are not configured as hidden HOT 1
- CCF page is empty HOT 6
- Delay in OLS picking up latest version of VBO HOT 3
- Ontology Xreference Service Link doesn't seem to work
- OBA preferred root node and show part_of hierarchy HOT 11
- Mondo update on OLS? HOT 4
- Issues with MAxO on OLS HOT 4
- Update CCF ontology information HOT 3
- dead URI (http://www.ebi.ac.uk/efo/EFO_0004349) HOT 2
- Gene Ontology not updating HOT 5
- Mondo update on OLS HOT 2
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