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alphafold

Open source code for AlphaFold.

chaotic-transformer-tutorials

clustools

Tools for clustering single cell sequencing data

deep_learning_in_proteomics

A list of tools on proteomics using deep learning

deepdof-se

deepsem

extract_go_slim_annotation

Extract GO annotations for a set of gene symbols using evidence types and counts from a GO Slim subset

futurehealthproteomicprediction

gc_nc-res

This project consists of three parts: Random forest model for GC diagnosis and Predict the survival outcomes of GC patient using RSF method.

immuno_notes

Immunology-related bioinformatics data and tools

maqc

Example code for the MAQC project (Quartet protein reference materials and datasets for multi-platform assessment of label-free proteomics)

mastering-machine-learning-with-r-third-edition

Mastering Machine Learning with R, Third edition, by Packt

nips-personalized-medicine

Project directory for NIPS Competition: Classifying Clinically Actionable Genetic Mutations

note

organage

A package to estimate biological organ age using SomaScan plasma proteomics data

pcareduce

phosmap

A Comprehensive R Package For Analyzing Quantitative Phosphoproteomics Data

phosmap_datasets

The respository contains datasets as embedded libraries of PhosMap

primekg

Precision Medicine Knowledge Graph (PrimeKG)

reflect

rosettafold

This package contains deep learning models and related scripts for RoseTTAFold

sclc_proteomics_samples

A code set was used for SCLC proteomics data analysis and visualization

tabby

A terminal for a more modern age

tcga_example