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albumentations

fast image augmentation library and easy to use wrapper around other libraries

awesome-semantic-segmentation

:metal: awesome-semantic-segmentation

ct-volume-preprocessing

End-to-end Python CT volume preprocessing pipeline to convert raw DICOMs into clean 3D numpy arrays for ML. From paper Draelos et al. "Machine-Learning-Based Multiple Abnormality Prediction with Large-Scale Chest Computed Tomography Volumes."

dbcv

Efficient implementation of Density-Based Clustering Validation (DBCV) metric, fully compatible with the original MATLAB implementation.

deep-thinking

A centralized place for deep thinking code and experiments

docker-centos7-slurm

Slurm Docker Container on CentOS 7

docker-slurm

Docker images with Slurm Workload Manager installed

experiments

Small experiments with attached code

feature-extraction-gray-level-co-occurrence-matrix-glcm-with-python

gpt-llm-trainer

jupyterlab-slurm

latticeboltzmann

A 2D Lattice Boltzmann program

latticeboltzmann-python

Lattice Boltzmann fluid simulation

lbm

A simple full-python 2D lattice-boltzmann code

llama

Inference code for LLaMA models

machine-learning-microservices

Project #4 from the Cloud DevOps Engineer Nanodegree Program - Udacity

py-glcm

Highly efficient GLCM/X-GLCM feature extractor for python.

pyclesperanto_prototype

GPU-accelerated bio-image analysis focusing on 3D+t microscopy image data

pysindy

A package for the sparse identification of nonlinear dynamical systems from data

segmentation_models

Segmentation models with pretrained backbones. Keras and TensorFlow Keras.

semantic-segmentation-digital-rock-physics

2D and 3D Unet, ResNet, ResUnet Architectures for Digital Rock Segmentation

sindyautoencoders

sindysr3

slurm-cluster

Docker local slurm cluster

slurm-docker-cluster

A Slurm cluster using docker-compose

slurm-in-docker

Slurm in Docker - Exploring Slurm using CentOS 7 based Docker images

slurm_gpu_ubuntu

Instructions for setting up a SLURM cluster using Ubuntu 18.04.3 with GPUs.

unet_brain_tumor_segmentation

Deep learning Brain tumor segmentation, BRATS2019

volumentations

Library for 3D augmentations

zf_unet_224_pretrained_model

Modification of convolutional neural net "UNET" for image segmentation in Keras framework