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11channel_olfactometer

6channel_quick_disconnect

Simultaneous quick disconnect for 6 independent gas lines.

al_analysis

Analysis for experiments in antennal lobe ramping concentrations of each component in odor pairs

al_atlas

alvarezsalvado_elementarytransformations

Data and code for Alvarez-Salvado et al. "Elementary sensory-motor transformations underlying olfactory navigation in walking fruit flies"

arduino_stimuli

Arduino sketches to deliver stimuli for experiments.

automate2p

For automating our ThorLabs two-photon acquisition habits.

caiman-matlab

Complete Matlab pipeline for large scale calcium imaging data analysis

chemutils

Convenience functions wrapping pubchempy

cutpaste_arduino_stimuli

Upload-to-start Arduino stimulus delivery.

darkbox_baffle

A set of walls for cables / tubes to enter a darkbox without letting much light in.

dz-imaging-analysis

elena_analysis

elena_olfactometer_configs

emily_olfactometer_configs

hong2p

Extracting / processing / storing fluorescence traces, and associating them with odor information.

hong_matlab

MATLAB scripts to wrap a Python module for more seamless interaction with it.

hong_setup

Scripts and files for reproducing the same workstation environments.

imagej_macros

imaging_exp_mon

Monitors ongoing ThorImage/Sync output to ensure experiment quality.

kc_natural_mixes

Analysis of KC experiments presenting ~5 component "natural" and "random" control mixtures.

labjack

ROS package for labjack data acquisition that streams to CSV.

litwin-kumar17

Code from Ashok's website accompanying his 2017 paper.

luo2010

Replication of modeling in Luo et al. 2010 (PNAS) for practice and as a starting point.

matlab_kc_plane

Remy's most recent single plane KC analysis.

metabolic_dists

misc_2d

One-off 2-dimensional designs, for the laser cutter.

misc_3d

One-off 3-dimensional designs, for machining or 3D printing.

multi_tracker

Multiple object tracking for single camera in ROS.

nagel_laminar