elelab Goto Github PK

all_markers

ambra_cmyc_medulloblastomar2

scripts and data associated to the publication on ambra1 in medulloblastoma

ambra_low

scripts and data for the analyses of expression levels of AMBRA1 and CHK1 in TCGA

angle_histograms

bcl_bh3only_breast_cancer

repository for publication on bh3-only and bcl proteins in breast cancer

bclxl-allo

repository associated to our publication on long-range communication in BCLxL

campp2

The CAMPP2 R package

campp2_former_repository

cancer-biomarker-prediction-pipeline-campp

The Cancer bioMarker Prediction Pipeline (CAMPP)

cancermuts

Software for the automatic annotation of cancer mutations

csx2-cross-validation

ddr-candidates

delta_cs

Software to compare experimental NMR chemical shifts with those predicted by PPM and CH3shift on molecular ensembles

disouim

eif4a3_rnaseq

channel for our data for publication on eIF4A3

environments_workshop

fak1_sno

repository associated with our publication on GSNOR deregulation in cancer and FAK S-nitrosylation

g_reff

helene_bachelor_project

Helene's bachelor project thesis

hgdh_engineering

lc3b_cancer_paper

repository with data from our publication on lc3b dynamics and mutations

lc3c_ndp52_ge_mutant

repository for the scripts and data associated with the simulations of the complex between LC3C and the LIR region of NDP52 G140E mutant variant

lipiddyn

repository associated to our pipeline for lipid dynamics

lipiddyn_case_studies

lipidq

lir_tfg

data associated with co-authored publication on LIR_TFG

luad_lusc_tcga_comparison

Scripts and Data associated with our publication on genomic signatures to discriminate LUAD and LUSC lung cancer types using TCGA data

mal_activity

repository for data and scripts for the manuscript on effects of mutations on the structure and activity of a MAL enzyme

mal_md

repository associated to our study on conformational gating in ammonia lyase

mavisp

the MAVISp database for structural variants annotation