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elihei2's Projects

cell2module icon cell2module

cell2module: decomposing scRNA and scATAC cell identity into gene modules using count-based Bayesian NMF

material icon material

Material for course STA426 at UZH, Fall Semester 2020

mcmicro icon mcmicro

Multiple-choice microscopy pipeline

scarches icon scarches

Query to reference mapping for single-cell genomics

scgen icon scgen

Single cell perturbation prediction

seqlearn icon seqlearn

SeqLearner is a multitask learning module for semi-supervised learning on biological sequences.

spatialdata icon spatialdata

Modular storage and efficient manipulation of spatial multimodal molecular data in Python

squidpy icon squidpy

Spatial Single Cell Analysis in Python

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