Comments (3)
If you haven't already, checkout BraTS example notebook for an explanation of the different arguments:
https://github.com/ellisdg/3DUnetCNN/blob/master/examples/brats2020/create_config_lowmem.ipynb
Some arguments you may consider changing:
- "desired_shape"
- "setup_label_hierarchy" should be false since you only have a mask as output based on your previous comment
- "resample" and "crop_foreground" may not be necessary depending on the images and image sizes in your dataset.
from 3dunetcnn.
I'm really sorry for bothering you,I'm using it to train in my own dataset.Discovering these images in the example folder after training, does it mean that the training was successful?"If it is successful, how should I run the predict.py file?
from 3dunetcnn.
Those are 3D renderings that I made as an example of skull completion using the AutoImplant dataset.
You should have a training log file that you can look at to see how many epochs were run and if the training and validation losses decreased like you would expect.
from 3dunetcnn.
Related Issues (20)
- problems in cross validation training HOT 8
- About Evaluation metrics for BraTS example HOT 3
- KeyError: 'config' during evaluation on brats example HOT 4
- I didn't make any changes. I couldn't find the file when I ran the sample file. HOT 2
- An error occurred during the evaluation HOT 2
- Issue with predict.py and resampling scans back into the original space. HOT 2
- The train.py seems no args of "model_filename" and "training_log_filename" HOT 2
- 請問已經訓練出模型出來,該如何去測試模型分割是否理想? HOT 9
- How to use it to train in my own dataset HOT 2
- I'm really sorry for bothering you HOT 2
- Unable to clone HOT 2
- Runtime errror HOT 5
- Runtime error
- ImportError: attempted relative import with no known parent package HOT 2
- Loss value is abnormal HOT 2
- predict.py issue HOT 1
- new issue HOT 1
- Can't run the program! HOT 3
- model name HOT 1
Recommend Projects
-
React
A declarative, efficient, and flexible JavaScript library for building user interfaces.
-
Vue.js
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
-
Typescript
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
-
TensorFlow
An Open Source Machine Learning Framework for Everyone
-
Django
The Web framework for perfectionists with deadlines.
-
Laravel
A PHP framework for web artisans
-
D3
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
-
Recommend Topics
-
javascript
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
-
web
Some thing interesting about web. New door for the world.
-
server
A server is a program made to process requests and deliver data to clients.
-
Machine learning
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
-
Visualization
Some thing interesting about visualization, use data art
-
Game
Some thing interesting about game, make everyone happy.
Recommend Org
-
Facebook
We are working to build community through open source technology. NB: members must have two-factor auth.
-
Microsoft
Open source projects and samples from Microsoft.
-
Google
Google ❤️ Open Source for everyone.
-
Alibaba
Alibaba Open Source for everyone
-
D3
Data-Driven Documents codes.
-
Tencent
China tencent open source team.
from 3dunetcnn.