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ericchansen avatar ericchansen commented on July 28, 2024

Do you want something like this? If the regex fails, go for it anyway. This may lead to data misalignment because MacroModel doesn't always return a nonzero exit status when it fails to complete a job, but I suppose it would fail either way.

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peonor avatar peonor commented on July 28, 2024

The only thing that would worry me in this case is if there is an old log file from a previous iteration around, that got used instead of the one that should have been created. As long as the data misalignment is guaranteed to cause a crash, not erroneous data, Iā€™d say let it run.

From: Eric Hansen [mailto:[email protected]]
Sent: den 7 juni 2016 17:13
To: ericchansen/q2mm [email protected]
Cc: Norrby, Per-Ola [email protected]; Author [email protected]
Subject: Re: [ericchansen/q2mm] License checking (#24)

Do you want something like this? If the regex fails, go for it anyway. This may lead to data misalignment because MacroModel doesn't always return a nonzero exit status when it fails to complete a job, but I suppose it would fail either way.

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ericchansen avatar ericchansen commented on July 28, 2024

Oh, good thinking. Maybe the simplest way to deal with this would be to delete .q2mm. files before attempting a new MacroModel calculation.

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peonor avatar peonor commented on July 28, 2024

Yes. It's not thinking, it's remembering (I've done sooo many mistakes in this field...)

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