fvaux Goto Github PK
Name: Felix Vaux
Type: User
Company: NIWA
Bio: Evolutionary biologist @niwa
Twitter: FelixVaux
Location: Wellington, New Zealand
Name: Felix Vaux
Type: User
Company: NIWA
Bio: Evolutionary biologist @niwa
Twitter: FelixVaux
Location: Wellington, New Zealand
Github Pages template for academic personal websites, forked from mmistakes/minimal-mistakes
Commands and input files for population genetic analysis of Deacon Rockfish using RADseq. Used for: Vaux F, Rasmuson LK, Kautzi LA, Rankin PS, Blume MTO, Lawrence KA, Bohn S, O’Malley KG. (2019). Sex matters: otolith shape and genomic variation in deacon rockfish (Sebastes diaconus). Ecology and Evolution 9(23), 13153-13173.
Some general scripts for bioinformatic file management
Commands and input files for the phylogeographic analysis of southern bull kelp Durvillaea antarctica using genotyping-by-sequencing data.
Course materials for the Genomics Aotearoa Metagenomics Summer School, to be hosted at the University of Auckland in December
A repository of bioinformatic scripts, SOPs, and tutorials for analyzing microbiome data.
Commands and input files for the population genetic and phylogenetic analysis of southern bull kelp Durvillaea poha using GBS. Used for: Vaux F, Craw D, Fraser CI, Waters JM. (2021). Northward range extension for Durvillaea poha bull kelp: response to tectonic disturbance? Journal of Phycology 57(5), 1411-1418.
Commands and input files for population genetic analysis of Pacific Albacore using ddRADseq. Used for: Vaux F, Bohn S, Hyde JR, O'Malley KGO. (2021). Adaptive markers distinguish North and South Pacific Albacore amid low population differentiation. Evolutionary Applications 14(5), 1343-1364.
R scripts for geometric morphometric analyses conducted on buccinoid true whelk shells (Aeneator, Antarctoneptunea, Kelletia, Penion) and tuatara dentary bones
Commands and input files for the phylogeographic analysis of southern bull kelp Durvillaea antarctica using genotyping-by-sequencing data. Used for: Vaux F, Craw D, Fraser CI, Waters JM. Parallel recolonisations generate distinct genomic sectors in kelp following high magnitude earthquake disturbance. Molecular Ecology (accepted)
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