gabaldonlab Goto Github PK

abaccus

Abaccus pipeline for detection of HGT events

asebybayes

Allele Specific Expression classified by Bayesian inference

bioconda-recipes

Conda recipes for the bioconda channel.

c.-orthopsilosis-ase

C. orthopsilosis ASE

c_glabrata_with_albumin

C_glabrata_with_albumin

candida_nextpars

candida_selection_drugresistance

candidamine-docs

CandidaMine Documentation Source.

crossmapper

Crossmapper software

detect_recombination

ete

Python package for building, comparing, annotating, manipulating and visualising trees. It provides a comprehensive API and a collection of command line tools, including utilities to work with the NCBI taxonomy tree.

evolclust

Evolcust retrieves groups of genes that appear clustered together in groups of species

fastaindex

FastA indexing and sequence retrival.

ghost_transfers

haplotypo

This is the Haplotypo repository

haplotypo_docker

hgt_detection

host-pathogen_interactions

Host-pathogen_interactions

how2code

Technical seminar regarding good practices in writing code and documentation

hybrid_project

Hybrid_project

imageanalysispipeline_solid96wellplates

intermine

Stable version of intermine used by candidamine and modified by us

jloh

A tool to extract LOH blocks from VCF, BAM and FASTA data

karyon

This is the Karyon Pipeline

karyon_docker

last

"Fork" of LAST (https://gitlab.com/mcfrith/last) v1418

last_v800

LAST finds similar regions between sequences.

lncrnas

script of lncRNA project

longham

LongHam assembly pipeline

lung_microbiome_16s