Comments (10)
welcome
commented on August 12, 2024
👋 Thanks for opening your first issue here! Please make sure you filled out the template with as much detail as possible. We appreciate that you took the time to contribute!
from gmt.
PaulWessel
commented on August 12, 2024
Hi @opoplawski, could you clarify: The message says it does find the file but cannot read due to wrong permissions. Are you saying this message is misleading (i.e., there is no such file there)?
from gmt.
opoplawski
commented on August 12, 2024
Correct, there is no file with that name there at all. The lower resolution versions are.
from gmt.
PaulWessel
commented on August 12, 2024
I guess I thought you build the GSHHG packages so why would it not install in the correct place? Anyway, could you run your command with -Vd and post the result please?
from gmt.
opoplawski
commented on August 12, 2024
We install the GSHHG files into /usr/share/gshhg-gmt-nc4 in order to separate them from being directly tied to GMT, in the admittedly unlikely event that some other software makes use of them. As mentioned above, will also allow people to only install the lower resolution files in case they don't need the higher resolution ones.
# gmt gmtget -Vd DIR_GSHHG
gmt: GMT->session.HOMEDIR = /builddir
gmt: GMT->session.USERDIR = /builddir/.gmt [created]
gmt: GMT->session.CACHEDIR = /builddir/.gmt/cache [created]
gmt: GMT: 1. gmt_getsharepath trying current dir
gmt: GMT: 2. gmt_getsharepath trying USERDIR /builddir/.gmt
gmt: GMT: 3. gmt_getsharepath trying USERDIR subdir /builddir/.gmt/postscriptlight
gmt: GMT: 4. gmt_getsharepath trying SHAREDIR subdir /usr/share/gmt/postscriptlight
gmt: Map distance calculation will be Cartesian
gmt: The PROJ_GEODESIC set to Vincenty
gmt: Initialize FFTW with 4 threads.
gmt: GMT_Create_Session initialized GMT structure
gmt: Shared Library # 0 (core). Path = libgmt.so
gmt: Loading core GMT shared library: libgmt.so
gmt: Loading GMT plugins from: /usr/lib64/gmt/plugins
gmt: Shared Library # 1 (supplements). Path = /usr/lib64/gmt/plugins/supplements.so
gmtget: api_init_export: Passed family = Text Table and geometry = Non-Geographical
gmtget: Object ID 0 : Registered Text Table Stream 7f2a90fd7780 as an Output resource with geometry Non-Geographical [n_objects = 1]
gmtget: api_init_export: Added stdout to registered destinations
gmtget: GMT_Init_IO: Returned first Output object ID = 0
gmtget: GMT_Begin_IO: Initialize record-by-record access for Output
gmtget: api_next_io_source: Selected object 0
gmtget: Writing Text Table to Standard Output stream
gmtget: GMT_Begin_IO: Output resource access is now enabled [record-by-record]
gmtget: 1. GSHHG: GSHHGDIR set, trying /usr/share/gshhg-gmt-nc4/binned_GSHHS_c.nc
gmtget: 1. GSHHG: OK, could access /usr/share/gshhg-gmt-nc4/binned_GSHHS_c.nc
gmtget: 1. GSHHG: GSHHGDIR set, trying /usr/share/gshhg-gmt-nc4/binned_river_c.nc
gmtget: 1. GSHHG: OK, could access /usr/share/gshhg-gmt-nc4/binned_river_c.nc
gmtget: 1. GSHHG: GSHHGDIR set, trying /usr/share/gshhg-gmt-nc4/binned_border_c.nc
gmtget: 1. GSHHG: OK, could access /usr/share/gshhg-gmt-nc4/binned_border_c.nc
gmtget: 1. GSHHG: GSHHGDIR set, trying /usr/share/gshhg-gmt-nc4/binned_GSHHS_l.nc
gmtget: 1. GSHHG: OK, could access /usr/share/gshhg-gmt-nc4/binned_GSHHS_l.nc
gmtget: 1. GSHHG: GSHHGDIR set, trying /usr/share/gshhg-gmt-nc4/binned_river_l.nc
gmtget: 1. GSHHG: OK, could access /usr/share/gshhg-gmt-nc4/binned_river_l.nc
gmtget: 1. GSHHG: GSHHGDIR set, trying /usr/share/gshhg-gmt-nc4/binned_border_l.nc
gmtget: 1. GSHHG: OK, could access /usr/share/gshhg-gmt-nc4/binned_border_l.nc
gmtget: 1. GSHHG: GSHHGDIR set, trying /usr/share/gshhg-gmt-nc4/binned_GSHHS_i.nc
gmtget: 1. GSHHG: OK, could access /usr/share/gshhg-gmt-nc4/binned_GSHHS_i.nc
gmtget: 1. GSHHG: GSHHGDIR set, trying /usr/share/gshhg-gmt-nc4/binned_river_i.nc
gmtget: 1. GSHHG: OK, could access /usr/share/gshhg-gmt-nc4/binned_river_i.nc
gmtget: 1. GSHHG: GSHHGDIR set, trying /usr/share/gshhg-gmt-nc4/binned_border_i.nc
gmtget: 1. GSHHG: OK, could access /usr/share/gshhg-gmt-nc4/binned_border_i.nc
gmtget: 1. GSHHG: GSHHGDIR set, trying /usr/share/gshhg-gmt-nc4/binned_GSHHS_h.nc
gmtget: 1. GSHHG: Failure, could not access /usr/share/gshhg-gmt-nc4/binned_GSHHS_h.nc
gmtget: GMT: 1. gmt_getsharepath trying current dir
gmtget: GMT: 2. gmt_getsharepath trying USERDIR /builddir/.gmt
gmtget: GMT: 3. gmt_getsharepath trying USERDIR subdir /builddir/.gmt/conf
gmtget: GMT: 4. gmt_getsharepath trying SHAREDIR subdir /usr/share/gmt/conf
gmtget: GMT: 5. gmt_getsharepath failed
gmtget: GMT: 1. gmt_getsharepath trying current dir
gmtget: GMT: 2. gmt_getsharepath trying USERDIR /builddir/.gmt
gmtget: GMT: 3. gmt_getsharepath trying USERDIR subdir /builddir/.gmt/coast
gmtget: GMT: 4. gmt_getsharepath trying SHAREDIR subdir /usr/share/gmt/coast
gmtget: 2. GSHHG: coastline.conf found at /usr/share/gmt/coast/coastline.conf
gmtget: 2. GSHHG: Trying /usr/share/gshhg-gmt-nc4/binned_GSHHS_h.nc
gmtget: Found /usr/share/gshhg-gmt-nc4/binned_GSHHS_h.cdf but cannot read it due to wrong permissions
gmtget: 3. GSHHG: Trying via sharepath
gmtget: GMT: 1. gmt_getsharepath trying current dir
gmtget: GMT: 2. gmt_getsharepath trying USERDIR /builddir/.gmt
gmtget: GMT: 3. gmt_getsharepath trying USERDIR subdir /builddir/.gmt/coast
gmtget: GMT: 4. gmt_getsharepath trying SHAREDIR subdir /usr/share/gmt/coast
gmtget: GMT: 5. gmt_getsharepath failed
gmtget: 4. GSHHG: Failure, could not access any GSHHG files
gmtget: GSHHG version 2.2.0 or newer is needed to use coastlines with GMT.
Get and install GSHHG from ftp://ftp.soest.hawaii.edu/gshhg/.
gmtget: GMT: 1. gmt_getsharepath trying current dir
gmtget: GMT: 2. gmt_getsharepath trying USERDIR /builddir/.gmt
gmtget: GMT: 3. gmt_getsharepath trying USERDIR subdir /builddir/.gmt/conf
gmtget: GMT: 4. gmt_getsharepath trying SHAREDIR subdir /usr/share/gmt/conf
gmtget: GMT: 5. gmt_getsharepath failed
gmtget: GMT: 1. gmt_getsharepath trying current dir
gmtget: GMT: 2. gmt_getsharepath trying USERDIR /builddir/.gmt
gmtget: GMT: 3. gmt_getsharepath trying USERDIR subdir /builddir/.gmt/coast
gmtget: GMT: 4. gmt_getsharepath trying SHAREDIR subdir /usr/share/gmt/coast
gmtget: 2. GSHHG: coastline.conf found at /usr/share/gmt/coast/coastline.conf
gmtget: 2. GSHHG: Trying /usr/share/gshhg-gmt-nc4/binned_river_h.nc
gmtget: Found /usr/share/gshhg-gmt-nc4/binned_river_h.cdf but cannot read it due to wrong permissions
gmtget: 3. GSHHG: Trying via sharepath
gmtget: GMT: 1. gmt_getsharepath trying current dir
gmtget: GMT: 2. gmt_getsharepath trying USERDIR /builddir/.gmt
gmtget: GMT: 3. gmt_getsharepath trying USERDIR subdir /builddir/.gmt/coast
gmtget: GMT: 4. gmt_getsharepath trying SHAREDIR subdir /usr/share/gmt/coast
gmtget: GMT: 5. gmt_getsharepath failed
gmtget: 4. GSHHG: Failure, could not access any GSHHG files
gmtget: GMT: 1. gmt_getsharepath trying current dir
gmtget: GMT: 2. gmt_getsharepath trying USERDIR /builddir/.gmt
gmtget: GMT: 3. gmt_getsharepath trying USERDIR subdir /builddir/.gmt/conf
gmtget: GMT: 4. gmt_getsharepath trying SHAREDIR subdir /usr/share/gmt/conf
gmtget: GMT: 5. gmt_getsharepath failed
gmtget: GMT: 1. gmt_getsharepath trying current dir
gmtget: GMT: 2. gmt_getsharepath trying USERDIR /builddir/.gmt
gmtget: GMT: 3. gmt_getsharepath trying USERDIR subdir /builddir/.gmt/coast
gmtget: GMT: 4. gmt_getsharepath trying SHAREDIR subdir /usr/share/gmt/coast
gmtget: 2. GSHHG: coastline.conf found at /usr/share/gmt/coast/coastline.conf
gmtget: 2. GSHHG: Trying /usr/share/gshhg-gmt-nc4/binned_border_h.nc
gmtget: Found /usr/share/gshhg-gmt-nc4/binned_border_h.cdf but cannot read it due to wrong permissions
gmtget: 3. GSHHG: Trying via sharepath
gmtget: GMT: 1. gmt_getsharepath trying current dir
gmtget: GMT: 2. gmt_getsharepath trying USERDIR /builddir/.gmt
gmtget: GMT: 3. gmt_getsharepath trying USERDIR subdir /builddir/.gmt/coast
gmtget: GMT: 4. gmt_getsharepath trying SHAREDIR subdir /usr/share/gmt/coast
gmtget: GMT: 5. gmt_getsharepath failed
gmtget: 4. GSHHG: Failure, could not access any GSHHG files
gmtget: GMT: 1. gmt_getsharepath trying current dir
gmtget: GMT: 2. gmt_getsharepath trying USERDIR /builddir/.gmt
gmtget: GMT: 3. gmt_getsharepath trying USERDIR subdir /builddir/.gmt/conf
gmtget: GMT: 4. gmt_getsharepath trying SHAREDIR subdir /usr/share/gmt/conf
gmtget: GMT: 5. gmt_getsharepath failed
gmtget: GMT: 1. gmt_getsharepath trying current dir
gmtget: GMT: 2. gmt_getsharepath trying USERDIR /builddir/.gmt
gmtget: GMT: 3. gmt_getsharepath trying USERDIR subdir /builddir/.gmt/coast
gmtget: GMT: 4. gmt_getsharepath trying SHAREDIR subdir /usr/share/gmt/coast
gmtget: 2. GSHHG: coastline.conf found at /usr/share/gmt/coast/coastline.conf
gmtget: 2. GSHHG: Trying /usr/share/gshhg-gmt-nc4/binned_GSHHS_f.nc
gmtget: Found /usr/share/gshhg-gmt-nc4/binned_GSHHS_f.cdf but cannot read it due to wrong permissions
gmtget: 3. GSHHG: Trying via sharepath
gmtget: GMT: 1. gmt_getsharepath trying current dir
gmtget: GMT: 2. gmt_getsharepath trying USERDIR /builddir/.gmt
gmtget: GMT: 3. gmt_getsharepath trying USERDIR subdir /builddir/.gmt/coast
gmtget: GMT: 4. gmt_getsharepath trying SHAREDIR subdir /usr/share/gmt/coast
gmtget: GMT: 5. gmt_getsharepath failed
gmtget: 4. GSHHG: Failure, could not access any GSHHG files
gmtget: GMT: 1. gmt_getsharepath trying current dir
gmtget: GMT: 2. gmt_getsharepath trying USERDIR /builddir/.gmt
gmtget: GMT: 3. gmt_getsharepath trying USERDIR subdir /builddir/.gmt/conf
gmtget: GMT: 4. gmt_getsharepath trying SHAREDIR subdir /usr/share/gmt/conf
gmtget: GMT: 5. gmt_getsharepath failed
gmtget: GMT: 1. gmt_getsharepath trying current dir
gmtget: GMT: 2. gmt_getsharepath trying USERDIR /builddir/.gmt
gmtget: GMT: 3. gmt_getsharepath trying USERDIR subdir /builddir/.gmt/coast
gmtget: GMT: 4. gmt_getsharepath trying SHAREDIR subdir /usr/share/gmt/coast
gmtget: 2. GSHHG: coastline.conf found at /usr/share/gmt/coast/coastline.conf
gmtget: 2. GSHHG: Trying /usr/share/gshhg-gmt-nc4/binned_river_f.nc
gmtget: Found /usr/share/gshhg-gmt-nc4/binned_river_f.cdf but cannot read it due to wrong permissions
gmtget: 3. GSHHG: Trying via sharepath
gmtget: GMT: 1. gmt_getsharepath trying current dir
gmtget: GMT: 2. gmt_getsharepath trying USERDIR /builddir/.gmt
gmtget: GMT: 3. gmt_getsharepath trying USERDIR subdir /builddir/.gmt/coast
gmtget: GMT: 4. gmt_getsharepath trying SHAREDIR subdir /usr/share/gmt/coast
gmtget: GMT: 5. gmt_getsharepath failed
gmtget: 4. GSHHG: Failure, could not access any GSHHG files
gmtget: GMT: 1. gmt_getsharepath trying current dir
gmtget: GMT: 2. gmt_getsharepath trying USERDIR /builddir/.gmt
gmtget: GMT: 3. gmt_getsharepath trying USERDIR subdir /builddir/.gmt/conf
gmtget: GMT: 4. gmt_getsharepath trying SHAREDIR subdir /usr/share/gmt/conf
gmtget: GMT: 5. gmt_getsharepath failed
gmtget: GMT: 1. gmt_getsharepath trying current dir
gmtget: GMT: 2. gmt_getsharepath trying USERDIR /builddir/.gmt
gmtget: GMT: 3. gmt_getsharepath trying USERDIR subdir /builddir/.gmt/coast
gmtget: GMT: 4. gmt_getsharepath trying SHAREDIR subdir /usr/share/gmt/coast
gmtget: 2. GSHHG: coastline.conf found at /usr/share/gmt/coast/coastline.conf
gmtget: 2. GSHHG: Trying /usr/share/gshhg-gmt-nc4/binned_border_f.nc
gmtget: Found /usr/share/gshhg-gmt-nc4/binned_border_f.cdf but cannot read it due to wrong permissions
gmtget: 3. GSHHG: Trying via sharepath
gmtget: GMT: 1. gmt_getsharepath trying current dir
gmtget: GMT: 2. gmt_getsharepath trying USERDIR /builddir/.gmt
gmtget: GMT: 3. gmt_getsharepath trying USERDIR subdir /builddir/.gmt/coast
gmtget: GMT: 4. gmt_getsharepath trying SHAREDIR subdir /usr/share/gmt/coast
gmtget: GMT: 5. gmt_getsharepath failed
gmtget: 4. GSHHG: Failure, could not access any GSHHG files
gmtget: GMT_End_IO: Output resource access is now disabled
gmtget: gmtapi_unregister_io: Unregistering object no 0 [n_objects = 0]
gmtget (gmtlib_free_tmp_arrays): tried to free unallocated memory
gmt: Entering GMT_Destroy_Session
# ls /usr/share/gshhg-gmt-nc4
binned_border_c.nc binned_border_l.nc binned_GSHHS_i.nc binned_river_c.nc binned_river_l.nc
binned_border_i.nc binned_GSHHS_c.nc binned_GSHHS_l.nc binned_river_i.nc
``
from gmt.
opoplawski
commented on August 12, 2024
We install the GSHHG files into /usr/share/gshhg-gmt-nc4 in order to separate them from being directly tied to GMT, in the admittedly unlikely event that some other software makes use of them. As mentioned above, will also allow people to only install the lower resolution files in case they don't need the higher resolution ones.
# gmt gmtget -Vd DIR_GSHHG
gmt: GMT->session.HOMEDIR = /builddir
gmt: GMT->session.USERDIR = /builddir/.gmt [created]
gmt: GMT->session.CACHEDIR = /builddir/.gmt/cache [created]
gmt: GMT: 1. gmt_getsharepath trying current dir
gmt: GMT: 2. gmt_getsharepath trying USERDIR /builddir/.gmt
gmt: GMT: 3. gmt_getsharepath trying USERDIR subdir /builddir/.gmt/postscriptlight
gmt: GMT: 4. gmt_getsharepath trying SHAREDIR subdir /usr/share/gmt/postscriptlight
gmt: Map distance calculation will be Cartesian
gmt: The PROJ_GEODESIC set to Vincenty
gmt: Initialize FFTW with 4 threads.
gmt: GMT_Create_Session initialized GMT structure
gmt: Shared Library # 0 (core). Path = libgmt.so
gmt: Loading core GMT shared library: libgmt.so
gmt: Loading GMT plugins from: /usr/lib64/gmt/plugins
gmt: Shared Library # 1 (supplements). Path = /usr/lib64/gmt/plugins/supplements.so
gmtget: api_init_export: Passed family = Text Table and geometry = Non-Geographical
gmtget: Object ID 0 : Registered Text Table Stream 7f2a90fd7780 as an Output resource with geometry Non-Geographical [n_objects = 1]
gmtget: api_init_export: Added stdout to registered destinations
gmtget: GMT_Init_IO: Returned first Output object ID = 0
gmtget: GMT_Begin_IO: Initialize record-by-record access for Output
gmtget: api_next_io_source: Selected object 0
gmtget: Writing Text Table to Standard Output stream
gmtget: GMT_Begin_IO: Output resource access is now enabled [record-by-record]
gmtget: 1. GSHHG: GSHHGDIR set, trying /usr/share/gshhg-gmt-nc4/binned_GSHHS_c.nc
gmtget: 1. GSHHG: OK, could access /usr/share/gshhg-gmt-nc4/binned_GSHHS_c.nc
gmtget: 1. GSHHG: GSHHGDIR set, trying /usr/share/gshhg-gmt-nc4/binned_river_c.nc
gmtget: 1. GSHHG: OK, could access /usr/share/gshhg-gmt-nc4/binned_river_c.nc
gmtget: 1. GSHHG: GSHHGDIR set, trying /usr/share/gshhg-gmt-nc4/binned_border_c.nc
gmtget: 1. GSHHG: OK, could access /usr/share/gshhg-gmt-nc4/binned_border_c.nc
gmtget: 1. GSHHG: GSHHGDIR set, trying /usr/share/gshhg-gmt-nc4/binned_GSHHS_l.nc
gmtget: 1. GSHHG: OK, could access /usr/share/gshhg-gmt-nc4/binned_GSHHS_l.nc
gmtget: 1. GSHHG: GSHHGDIR set, trying /usr/share/gshhg-gmt-nc4/binned_river_l.nc
gmtget: 1. GSHHG: OK, could access /usr/share/gshhg-gmt-nc4/binned_river_l.nc
gmtget: 1. GSHHG: GSHHGDIR set, trying /usr/share/gshhg-gmt-nc4/binned_border_l.nc
gmtget: 1. GSHHG: OK, could access /usr/share/gshhg-gmt-nc4/binned_border_l.nc
gmtget: 1. GSHHG: GSHHGDIR set, trying /usr/share/gshhg-gmt-nc4/binned_GSHHS_i.nc
gmtget: 1. GSHHG: OK, could access /usr/share/gshhg-gmt-nc4/binned_GSHHS_i.nc
gmtget: 1. GSHHG: GSHHGDIR set, trying /usr/share/gshhg-gmt-nc4/binned_river_i.nc
gmtget: 1. GSHHG: OK, could access /usr/share/gshhg-gmt-nc4/binned_river_i.nc
gmtget: 1. GSHHG: GSHHGDIR set, trying /usr/share/gshhg-gmt-nc4/binned_border_i.nc
gmtget: 1. GSHHG: OK, could access /usr/share/gshhg-gmt-nc4/binned_border_i.nc
gmtget: 1. GSHHG: GSHHGDIR set, trying /usr/share/gshhg-gmt-nc4/binned_GSHHS_h.nc
gmtget: 1. GSHHG: Failure, could not access /usr/share/gshhg-gmt-nc4/binned_GSHHS_h.nc
gmtget: GMT: 1. gmt_getsharepath trying current dir
gmtget: GMT: 2. gmt_getsharepath trying USERDIR /builddir/.gmt
gmtget: GMT: 3. gmt_getsharepath trying USERDIR subdir /builddir/.gmt/conf
gmtget: GMT: 4. gmt_getsharepath trying SHAREDIR subdir /usr/share/gmt/conf
gmtget: GMT: 5. gmt_getsharepath failed
gmtget: GMT: 1. gmt_getsharepath trying current dir
gmtget: GMT: 2. gmt_getsharepath trying USERDIR /builddir/.gmt
gmtget: GMT: 3. gmt_getsharepath trying USERDIR subdir /builddir/.gmt/coast
gmtget: GMT: 4. gmt_getsharepath trying SHAREDIR subdir /usr/share/gmt/coast
gmtget: 2. GSHHG: coastline.conf found at /usr/share/gmt/coast/coastline.conf
gmtget: 2. GSHHG: Trying /usr/share/gshhg-gmt-nc4/binned_GSHHS_h.nc
gmtget: Found /usr/share/gshhg-gmt-nc4/binned_GSHHS_h.cdf but cannot read it due to wrong permissions
gmtget: 3. GSHHG: Trying via sharepath
gmtget: GMT: 1. gmt_getsharepath trying current dir
gmtget: GMT: 2. gmt_getsharepath trying USERDIR /builddir/.gmt
gmtget: GMT: 3. gmt_getsharepath trying USERDIR subdir /builddir/.gmt/coast
gmtget: GMT: 4. gmt_getsharepath trying SHAREDIR subdir /usr/share/gmt/coast
gmtget: GMT: 5. gmt_getsharepath failed
gmtget: 4. GSHHG: Failure, could not access any GSHHG files
gmtget: GSHHG version 2.2.0 or newer is needed to use coastlines with GMT.
Get and install GSHHG from ftp://ftp.soest.hawaii.edu/gshhg/.
gmtget: GMT: 1. gmt_getsharepath trying current dir
gmtget: GMT: 2. gmt_getsharepath trying USERDIR /builddir/.gmt
gmtget: GMT: 3. gmt_getsharepath trying USERDIR subdir /builddir/.gmt/conf
gmtget: GMT: 4. gmt_getsharepath trying SHAREDIR subdir /usr/share/gmt/conf
gmtget: GMT: 5. gmt_getsharepath failed
gmtget: GMT: 1. gmt_getsharepath trying current dir
gmtget: GMT: 2. gmt_getsharepath trying USERDIR /builddir/.gmt
gmtget: GMT: 3. gmt_getsharepath trying USERDIR subdir /builddir/.gmt/coast
gmtget: GMT: 4. gmt_getsharepath trying SHAREDIR subdir /usr/share/gmt/coast
gmtget: 2. GSHHG: coastline.conf found at /usr/share/gmt/coast/coastline.conf
gmtget: 2. GSHHG: Trying /usr/share/gshhg-gmt-nc4/binned_river_h.nc
gmtget: Found /usr/share/gshhg-gmt-nc4/binned_river_h.cdf but cannot read it due to wrong permissions
gmtget: 3. GSHHG: Trying via sharepath
gmtget: GMT: 1. gmt_getsharepath trying current dir
gmtget: GMT: 2. gmt_getsharepath trying USERDIR /builddir/.gmt
gmtget: GMT: 3. gmt_getsharepath trying USERDIR subdir /builddir/.gmt/coast
gmtget: GMT: 4. gmt_getsharepath trying SHAREDIR subdir /usr/share/gmt/coast
gmtget: GMT: 5. gmt_getsharepath failed
gmtget: 4. GSHHG: Failure, could not access any GSHHG files
gmtget: GMT: 1. gmt_getsharepath trying current dir
gmtget: GMT: 2. gmt_getsharepath trying USERDIR /builddir/.gmt
gmtget: GMT: 3. gmt_getsharepath trying USERDIR subdir /builddir/.gmt/conf
gmtget: GMT: 4. gmt_getsharepath trying SHAREDIR subdir /usr/share/gmt/conf
gmtget: GMT: 5. gmt_getsharepath failed
gmtget: GMT: 1. gmt_getsharepath trying current dir
gmtget: GMT: 2. gmt_getsharepath trying USERDIR /builddir/.gmt
gmtget: GMT: 3. gmt_getsharepath trying USERDIR subdir /builddir/.gmt/coast
gmtget: GMT: 4. gmt_getsharepath trying SHAREDIR subdir /usr/share/gmt/coast
gmtget: 2. GSHHG: coastline.conf found at /usr/share/gmt/coast/coastline.conf
gmtget: 2. GSHHG: Trying /usr/share/gshhg-gmt-nc4/binned_border_h.nc
gmtget: Found /usr/share/gshhg-gmt-nc4/binned_border_h.cdf but cannot read it due to wrong permissions
gmtget: 3. GSHHG: Trying via sharepath
gmtget: GMT: 1. gmt_getsharepath trying current dir
gmtget: GMT: 2. gmt_getsharepath trying USERDIR /builddir/.gmt
gmtget: GMT: 3. gmt_getsharepath trying USERDIR subdir /builddir/.gmt/coast
gmtget: GMT: 4. gmt_getsharepath trying SHAREDIR subdir /usr/share/gmt/coast
gmtget: GMT: 5. gmt_getsharepath failed
gmtget: 4. GSHHG: Failure, could not access any GSHHG files
gmtget: GMT: 1. gmt_getsharepath trying current dir
gmtget: GMT: 2. gmt_getsharepath trying USERDIR /builddir/.gmt
gmtget: GMT: 3. gmt_getsharepath trying USERDIR subdir /builddir/.gmt/conf
gmtget: GMT: 4. gmt_getsharepath trying SHAREDIR subdir /usr/share/gmt/conf
gmtget: GMT: 5. gmt_getsharepath failed
gmtget: GMT: 1. gmt_getsharepath trying current dir
gmtget: GMT: 2. gmt_getsharepath trying USERDIR /builddir/.gmt
gmtget: GMT: 3. gmt_getsharepath trying USERDIR subdir /builddir/.gmt/coast
gmtget: GMT: 4. gmt_getsharepath trying SHAREDIR subdir /usr/share/gmt/coast
gmtget: 2. GSHHG: coastline.conf found at /usr/share/gmt/coast/coastline.conf
gmtget: 2. GSHHG: Trying /usr/share/gshhg-gmt-nc4/binned_GSHHS_f.nc
gmtget: Found /usr/share/gshhg-gmt-nc4/binned_GSHHS_f.cdf but cannot read it due to wrong permissions
gmtget: 3. GSHHG: Trying via sharepath
gmtget: GMT: 1. gmt_getsharepath trying current dir
gmtget: GMT: 2. gmt_getsharepath trying USERDIR /builddir/.gmt
gmtget: GMT: 3. gmt_getsharepath trying USERDIR subdir /builddir/.gmt/coast
gmtget: GMT: 4. gmt_getsharepath trying SHAREDIR subdir /usr/share/gmt/coast
gmtget: GMT: 5. gmt_getsharepath failed
gmtget: 4. GSHHG: Failure, could not access any GSHHG files
gmtget: GMT: 1. gmt_getsharepath trying current dir
gmtget: GMT: 2. gmt_getsharepath trying USERDIR /builddir/.gmt
gmtget: GMT: 3. gmt_getsharepath trying USERDIR subdir /builddir/.gmt/conf
gmtget: GMT: 4. gmt_getsharepath trying SHAREDIR subdir /usr/share/gmt/conf
gmtget: GMT: 5. gmt_getsharepath failed
gmtget: GMT: 1. gmt_getsharepath trying current dir
gmtget: GMT: 2. gmt_getsharepath trying USERDIR /builddir/.gmt
gmtget: GMT: 3. gmt_getsharepath trying USERDIR subdir /builddir/.gmt/coast
gmtget: GMT: 4. gmt_getsharepath trying SHAREDIR subdir /usr/share/gmt/coast
gmtget: 2. GSHHG: coastline.conf found at /usr/share/gmt/coast/coastline.conf
gmtget: 2. GSHHG: Trying /usr/share/gshhg-gmt-nc4/binned_river_f.nc
gmtget: Found /usr/share/gshhg-gmt-nc4/binned_river_f.cdf but cannot read it due to wrong permissions
gmtget: 3. GSHHG: Trying via sharepath
gmtget: GMT: 1. gmt_getsharepath trying current dir
gmtget: GMT: 2. gmt_getsharepath trying USERDIR /builddir/.gmt
gmtget: GMT: 3. gmt_getsharepath trying USERDIR subdir /builddir/.gmt/coast
gmtget: GMT: 4. gmt_getsharepath trying SHAREDIR subdir /usr/share/gmt/coast
gmtget: GMT: 5. gmt_getsharepath failed
gmtget: 4. GSHHG: Failure, could not access any GSHHG files
gmtget: GMT: 1. gmt_getsharepath trying current dir
gmtget: GMT: 2. gmt_getsharepath trying USERDIR /builddir/.gmt
gmtget: GMT: 3. gmt_getsharepath trying USERDIR subdir /builddir/.gmt/conf
gmtget: GMT: 4. gmt_getsharepath trying SHAREDIR subdir /usr/share/gmt/conf
gmtget: GMT: 5. gmt_getsharepath failed
gmtget: GMT: 1. gmt_getsharepath trying current dir
gmtget: GMT: 2. gmt_getsharepath trying USERDIR /builddir/.gmt
gmtget: GMT: 3. gmt_getsharepath trying USERDIR subdir /builddir/.gmt/coast
gmtget: GMT: 4. gmt_getsharepath trying SHAREDIR subdir /usr/share/gmt/coast
gmtget: 2. GSHHG: coastline.conf found at /usr/share/gmt/coast/coastline.conf
gmtget: 2. GSHHG: Trying /usr/share/gshhg-gmt-nc4/binned_border_f.nc
gmtget: Found /usr/share/gshhg-gmt-nc4/binned_border_f.cdf but cannot read it due to wrong permissions
gmtget: 3. GSHHG: Trying via sharepath
gmtget: GMT: 1. gmt_getsharepath trying current dir
gmtget: GMT: 2. gmt_getsharepath trying USERDIR /builddir/.gmt
gmtget: GMT: 3. gmt_getsharepath trying USERDIR subdir /builddir/.gmt/coast
gmtget: GMT: 4. gmt_getsharepath trying SHAREDIR subdir /usr/share/gmt/coast
gmtget: GMT: 5. gmt_getsharepath failed
gmtget: 4. GSHHG: Failure, could not access any GSHHG files
gmtget: GMT_End_IO: Output resource access is now disabled
gmtget: gmtapi_unregister_io: Unregistering object no 0 [n_objects = 0]
gmtget (gmtlib_free_tmp_arrays): tried to free unallocated memory
gmt: Entering GMT_Destroy_Session
# ls /usr/share/gshhg-gmt-nc4
binned_border_c.nc binned_border_l.nc binned_GSHHS_i.nc binned_river_c.nc binned_river_l.nc
binned_border_i.nc binned_GSHHS_c.nc binned_GSHHS_l.nc binned_river_i.nc
``
from gmt.
stale
commented on August 12, 2024
This issue has been automatically marked as stale because it has not had activity in the last 30 days. It will be closed if no further activity occurs within 7 days. Thank you for your contributions.
from gmt.
opoplawski
commented on August 12, 2024
With pull #252:
# gmt gmtget -Vd DIR_GSHHG
gmt: GMT->session.HOMEDIR = /builddir
gmt: GMT->session.USERDIR = /builddir/.gmt [created]
gmt: GMT->session.CACHEDIR = /builddir/.gmt/cache [created]
gmt: GMT: 1. gmt_getsharepath trying current dir
gmt: GMT: 2. gmt_getsharepath trying USERDIR /builddir/.gmt
gmt: GMT: 3. gmt_getsharepath trying USERDIR subdir /builddir/.gmt/postscriptlight
gmt: GMT: 4. gmt_getsharepath trying SHAREDIR subdir /usr/share/gmt/postscriptlight
gmt: Map distance calculation will be Cartesian
gmt: The PROJ_GEODESIC set to Vincenty
gmt: Initialize FFTW with 4 threads.
gmt: GMT_Create_Session initialized GMT structure
gmt: Shared Library # 0 (core). Path = libgmt.so
gmt: Loading core GMT shared library: libgmt.so
gmt: Loading GMT plugins from: /usr/lib64/gmt/plugins
gmt: Shared Library # 1 (supplements). Path = /usr/lib64/gmt/plugins/supplements.so
gmtget: api_init_export: Passed family = Text Table and geometry = Non-Geographical
gmtget: Object ID 0 : Registered Text Table Stream 7f805a36b780 as an Output resource with geometry Non-Geographical [n_objects = 1]
gmtget: api_init_export: Added stdout to registered destinations
gmtget: GMT_Init_IO: Returned first Output object ID = 0
gmtget: GMT_Begin_IO: Initialize record-by-record access for Output
gmtget: api_next_io_source: Selected object 0
gmtget: Writing Text Table to Standard Output stream
gmtget: GMT_Begin_IO: Output resource access is now enabled [record-by-record]
gmtget: 1. GSHHG: GSHHGDIR set, trying /usr/share/gshhg-gmt-nc4/binned_GSHHS_c.nc
gmtget: 1. GSHHG: OK, could access /usr/share/gshhg-gmt-nc4/binned_GSHHS_c.nc
gmtget: 1. GSHHG: GSHHGDIR set, trying /usr/share/gshhg-gmt-nc4/binned_river_c.nc
gmtget: 1. GSHHG: OK, could access /usr/share/gshhg-gmt-nc4/binned_river_c.nc
gmtget: 1. GSHHG: GSHHGDIR set, trying /usr/share/gshhg-gmt-nc4/binned_border_c.nc
gmtget: 1. GSHHG: OK, could access /usr/share/gshhg-gmt-nc4/binned_border_c.nc
gmtget: 1. GSHHG: GSHHGDIR set, trying /usr/share/gshhg-gmt-nc4/binned_GSHHS_l.nc
gmtget: 1. GSHHG: OK, could access /usr/share/gshhg-gmt-nc4/binned_GSHHS_l.nc
gmtget: 1. GSHHG: GSHHGDIR set, trying /usr/share/gshhg-gmt-nc4/binned_river_l.nc
gmtget: 1. GSHHG: OK, could access /usr/share/gshhg-gmt-nc4/binned_river_l.nc
gmtget: 1. GSHHG: GSHHGDIR set, trying /usr/share/gshhg-gmt-nc4/binned_border_l.nc
gmtget: 1. GSHHG: OK, could access /usr/share/gshhg-gmt-nc4/binned_border_l.nc
gmtget: 1. GSHHG: GSHHGDIR set, trying /usr/share/gshhg-gmt-nc4/binned_GSHHS_i.nc
gmtget: 1. GSHHG: OK, could access /usr/share/gshhg-gmt-nc4/binned_GSHHS_i.nc
gmtget: 1. GSHHG: GSHHGDIR set, trying /usr/share/gshhg-gmt-nc4/binned_river_i.nc
gmtget: 1. GSHHG: OK, could access /usr/share/gshhg-gmt-nc4/binned_river_i.nc
gmtget: 1. GSHHG: GSHHGDIR set, trying /usr/share/gshhg-gmt-nc4/binned_border_i.nc
gmtget: 1. GSHHG: OK, could access /usr/share/gshhg-gmt-nc4/binned_border_i.nc
gmtget: 1. GSHHG: GSHHGDIR set, trying /usr/share/gshhg-gmt-nc4/binned_GSHHS_h.nc
gmtget: 1. GSHHG: Failure, could not access /usr/share/gshhg-gmt-nc4/binned_GSHHS_h.nc
gmtget: GMT: 1. gmt_getsharepath trying current dir
gmtget: GMT: 2. gmt_getsharepath trying USERDIR /builddir/.gmt
gmtget: GMT: 3. gmt_getsharepath trying USERDIR subdir /builddir/.gmt/conf
gmtget: GMT: 4. gmt_getsharepath trying SHAREDIR subdir /usr/share/gmt/conf
gmtget: GMT: 5. gmt_getsharepath failed
gmtget: GMT: 1. gmt_getsharepath trying current dir
gmtget: GMT: 2. gmt_getsharepath trying USERDIR /builddir/.gmt
gmtget: GMT: 3. gmt_getsharepath trying USERDIR subdir /builddir/.gmt/coast
gmtget: GMT: 4. gmt_getsharepath trying SHAREDIR subdir /usr/share/gmt/coast
gmtget: 2. GSHHG: coastline.conf found at /usr/share/gmt/coast/coastline.conf
gmtget: 2. GSHHG: Trying /usr/share/gshhg-gmt-nc4/binned_GSHHS_h.nc
gmtget: 2. GSHHG: Found /usr/share/gshhg-gmt-nc4/binned_GSHHS_h.cdf but cannot read it due to wrong permissions
gmtget: 3. GSHHG: Trying via sharepath
gmtget: GMT: 1. gmt_getsharepath trying current dir
gmtget: GMT: 2. gmt_getsharepath trying USERDIR /builddir/.gmt
gmtget: GMT: 3. gmt_getsharepath trying USERDIR subdir /builddir/.gmt/coast
gmtget: GMT: 4. gmt_getsharepath trying SHAREDIR subdir /usr/share/gmt/coast
gmtget: GMT: 5. gmt_getsharepath failed
gmtget: 4. GSHHG: Failure, could not access any GSHHG files
gmtget: GSHHG version 2.2.0 or newer is needed to use coastlines with GMT.
Get and install GSHHG from ftp://ftp.soest.hawaii.edu/gshhg/.
gmtget: GMT: 1. gmt_getsharepath trying current dir
gmtget: GMT: 2. gmt_getsharepath trying USERDIR /builddir/.gmt
gmtget: GMT: 3. gmt_getsharepath trying USERDIR subdir /builddir/.gmt/conf
gmtget: GMT: 4. gmt_getsharepath trying SHAREDIR subdir /usr/share/gmt/conf
gmtget: GMT: 5. gmt_getsharepath failed
gmtget: GMT: 1. gmt_getsharepath trying current dir
gmtget: GMT: 2. gmt_getsharepath trying USERDIR /builddir/.gmt
gmtget: GMT: 3. gmt_getsharepath trying USERDIR subdir /builddir/.gmt/coast
gmtget: GMT: 4. gmt_getsharepath trying SHAREDIR subdir /usr/share/gmt/coast
gmtget: 2. GSHHG: coastline.conf found at /usr/share/gmt/coast/coastline.conf
gmtget: 2. GSHHG: Trying /usr/share/gshhg-gmt-nc4/binned_river_h.nc
gmtget: 2. GSHHG: Found /usr/share/gshhg-gmt-nc4/binned_river_h.cdf but cannot read it due to wrong permissions
gmtget: 3. GSHHG: Trying via sharepath
gmtget: GMT: 1. gmt_getsharepath trying current dir
gmtget: GMT: 2. gmt_getsharepath trying USERDIR /builddir/.gmt
gmtget: GMT: 3. gmt_getsharepath trying USERDIR subdir /builddir/.gmt/coast
gmtget: GMT: 4. gmt_getsharepath trying SHAREDIR subdir /usr/share/gmt/coast
gmtget: GMT: 5. gmt_getsharepath failed
gmtget: 4. GSHHG: Failure, could not access any GSHHG files
gmtget: GMT: 1. gmt_getsharepath trying current dir
gmtget: GMT: 2. gmt_getsharepath trying USERDIR /builddir/.gmt
gmtget: GMT: 3. gmt_getsharepath trying USERDIR subdir /builddir/.gmt/conf
gmtget: GMT: 4. gmt_getsharepath trying SHAREDIR subdir /usr/share/gmt/conf
gmtget: GMT: 5. gmt_getsharepath failed
gmtget: GMT: 1. gmt_getsharepath trying current dir
gmtget: GMT: 2. gmt_getsharepath trying USERDIR /builddir/.gmt
gmtget: GMT: 3. gmt_getsharepath trying USERDIR subdir /builddir/.gmt/coast
gmtget: GMT: 4. gmt_getsharepath trying SHAREDIR subdir /usr/share/gmt/coast
gmtget: 2. GSHHG: coastline.conf found at /usr/share/gmt/coast/coastline.conf
gmtget: 2. GSHHG: Trying /usr/share/gshhg-gmt-nc4/binned_border_h.nc
gmtget: 2. GSHHG: Found /usr/share/gshhg-gmt-nc4/binned_border_h.cdf but cannot read it due to wrong permissions
gmtget: 3. GSHHG: Trying via sharepath
gmtget: GMT: 1. gmt_getsharepath trying current dir
gmtget: GMT: 2. gmt_getsharepath trying USERDIR /builddir/.gmt
gmtget: GMT: 3. gmt_getsharepath trying USERDIR subdir /builddir/.gmt/coast
gmtget: GMT: 4. gmt_getsharepath trying SHAREDIR subdir /usr/share/gmt/coast
gmtget: GMT: 5. gmt_getsharepath failed
gmtget: 4. GSHHG: Failure, could not access any GSHHG files
gmtget: GMT: 1. gmt_getsharepath trying current dir
gmtget: GMT: 2. gmt_getsharepath trying USERDIR /builddir/.gmt
gmtget: GMT: 3. gmt_getsharepath trying USERDIR subdir /builddir/.gmt/conf
gmtget: GMT: 4. gmt_getsharepath trying SHAREDIR subdir /usr/share/gmt/conf
gmtget: GMT: 5. gmt_getsharepath failed
gmtget: GMT: 1. gmt_getsharepath trying current dir
gmtget: GMT: 2. gmt_getsharepath trying USERDIR /builddir/.gmt
gmtget: GMT: 3. gmt_getsharepath trying USERDIR subdir /builddir/.gmt/coast
gmtget: GMT: 4. gmt_getsharepath trying SHAREDIR subdir /usr/share/gmt/coast
gmtget: 2. GSHHG: coastline.conf found at /usr/share/gmt/coast/coastline.conf
gmtget: 2. GSHHG: Trying /usr/share/gshhg-gmt-nc4/binned_GSHHS_f.nc
gmtget: 2. GSHHG: Found /usr/share/gshhg-gmt-nc4/binned_GSHHS_f.cdf but cannot read it due to wrong permissions
gmtget: 3. GSHHG: Trying via sharepath
gmtget: GMT: 1. gmt_getsharepath trying current dir
gmtget: GMT: 2. gmt_getsharepath trying USERDIR /builddir/.gmt
gmtget: GMT: 3. gmt_getsharepath trying USERDIR subdir /builddir/.gmt/coast
gmtget: GMT: 4. gmt_getsharepath trying SHAREDIR subdir /usr/share/gmt/coast
gmtget: GMT: 5. gmt_getsharepath failed
gmtget: 4. GSHHG: Failure, could not access any GSHHG files
gmtget: GMT: 1. gmt_getsharepath trying current dir
gmtget: GMT: 2. gmt_getsharepath trying USERDIR /builddir/.gmt
gmtget: GMT: 3. gmt_getsharepath trying USERDIR subdir /builddir/.gmt/conf
gmtget: GMT: 4. gmt_getsharepath trying SHAREDIR subdir /usr/share/gmt/conf
gmtget: GMT: 5. gmt_getsharepath failed
gmtget: GMT: 1. gmt_getsharepath trying current dir
gmtget: GMT: 2. gmt_getsharepath trying USERDIR /builddir/.gmt
gmtget: GMT: 3. gmt_getsharepath trying USERDIR subdir /builddir/.gmt/coast
gmtget: GMT: 4. gmt_getsharepath trying SHAREDIR subdir /usr/share/gmt/coast
gmtget: 2. GSHHG: coastline.conf found at /usr/share/gmt/coast/coastline.conf
gmtget: 2. GSHHG: Trying /usr/share/gshhg-gmt-nc4/binned_river_f.nc
gmtget: 2. GSHHG: Found /usr/share/gshhg-gmt-nc4/binned_river_f.cdf but cannot read it due to wrong permissions
gmtget: 3. GSHHG: Trying via sharepath
gmtget: GMT: 1. gmt_getsharepath trying current dir
gmtget: GMT: 2. gmt_getsharepath trying USERDIR /builddir/.gmt
gmtget: GMT: 3. gmt_getsharepath trying USERDIR subdir /builddir/.gmt/coast
gmtget: GMT: 4. gmt_getsharepath trying SHAREDIR subdir /usr/share/gmt/coast
gmtget: GMT: 5. gmt_getsharepath failed
gmtget: 4. GSHHG: Failure, could not access any GSHHG files
gmtget: GMT: 1. gmt_getsharepath trying current dir
gmtget: GMT: 2. gmt_getsharepath trying USERDIR /builddir/.gmt
gmtget: GMT: 3. gmt_getsharepath trying USERDIR subdir /builddir/.gmt/conf
gmtget: GMT: 4. gmt_getsharepath trying SHAREDIR subdir /usr/share/gmt/conf
gmtget: GMT: 5. gmt_getsharepath failed
gmtget: GMT: 1. gmt_getsharepath trying current dir
gmtget: GMT: 2. gmt_getsharepath trying USERDIR /builddir/.gmt
gmtget: GMT: 3. gmt_getsharepath trying USERDIR subdir /builddir/.gmt/coast
gmtget: GMT: 4. gmt_getsharepath trying SHAREDIR subdir /usr/share/gmt/coast
gmtget: 2. GSHHG: coastline.conf found at /usr/share/gmt/coast/coastline.conf
gmtget: 2. GSHHG: Trying /usr/share/gshhg-gmt-nc4/binned_border_f.nc
gmtget: 2. GSHHG: Found /usr/share/gshhg-gmt-nc4/binned_border_f.cdf but cannot read it due to wrong permissions
gmtget: 3. GSHHG: Trying via sharepath
gmtget: GMT: 1. gmt_getsharepath trying current dir
gmtget: GMT: 2. gmt_getsharepath trying USERDIR /builddir/.gmt
gmtget: GMT: 3. gmt_getsharepath trying USERDIR subdir /builddir/.gmt/coast
gmtget: GMT: 4. gmt_getsharepath trying SHAREDIR subdir /usr/share/gmt/coast
gmtget: GMT: 5. gmt_getsharepath failed
gmtget: 4. GSHHG: Failure, could not access any GSHHG files
gmtget: GMT_End_IO: Output resource access is now disabled
gmtget: gmtapi_unregister_io: Unregistering object no 0 [n_objects = 0]
gmtget (gmtlib_free_tmp_arrays): tried to free unallocated memory
gmt: Entering GMT_Destroy_Session
# ls -l /usr/share/gshhg-gmt-nc4/
total 4584
-rw-r--r--. 1 root root 125784 Oct 29 2014 binned_GSHHS_c.nc
-rw-r--r--. 1 root root 2195066 Oct 29 2014 binned_GSHHS_i.nc
-rw-r--r--. 1 root root 539315 Oct 29 2014 binned_GSHHS_l.nc
-rw-r--r--. 1 root root 51064 Oct 29 2014 binned_border_c.nc
-rw-r--r--. 1 root root 207148 Oct 29 2014 binned_border_i.nc
-rw-r--r--. 1 root root 88824 Oct 29 2014 binned_border_l.nc
-rw-r--r--. 1 root root 219467 Oct 29 2014 binned_river_c.nc
-rw-r--r--. 1 root root 898855 Oct 29 2014 binned_river_i.nc
-rw-r--r--. 1 root root 355145 Oct 29 2014 binned_river_l.nc
from gmt.
PaulWessel
commented on August 12, 2024
I was able to reproduce the issue and now have fixed it in the repositories.
from gmt.
opoplawski
commented on August 12, 2024
Thank you.
from gmt.
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from gmt.