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Comments (3)

vjcitn avatar vjcitn commented on July 21, 2024

This has now been updated. A for loop was substituted for lapply. Additionally
the computations dependent upon geometadb.sqlite have been eliminated, the
tasks are simply narrated and results given textually for those capable of handling the
8GB sqlite.

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gillsignals avatar gillsignals commented on July 21, 2024

This works - thanks!

If I see this error elsewhere in the book, I will replace with a for loop.

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AntoniaChroni avatar AntoniaChroni commented on July 21, 2024

hey, I am running into this error when I am trying to combine peaks in atac data.
combined.peaks <- reduce(c(peaks$sample1, peaks$sample2, peaks$sample3, peaks$sample4 ))

Can you please provide the solution?

Error in getListElement(x, i, ...) :
GRanges objects don't support [[, as.list(), lapply(), or unlist() at
the moment

Thanks!

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