gergelyturi Goto Github PK

3dscript

allensdk

apartment-finder

A Slack bot that helps you find an apartment.

bctpy

brain connectivity toolbox for python

behaviormate

static version of the behavior recording software used with the 2p rig.

behaviorprotocols

programs for Medassociates behavior chambers

boxplotr.shiny

shiny application to generate box plots with R

caiman

Computational toolbox for large scale Calcium Imaging Analysis, including movie handling, motion correction, source extraction, spike deconvolution and result visualization.

candle-j

Collaborative Approach for eNhanced Denoising under Low-light Excitation

cellreg

Registration of cells across sessions.

chronicsleeprecordings

codes

custom scripts for behavior and image analysis

context-project

analysis code for context project

contextbox

Behavior box for mice conductung contextual discrimination task

d3

Bring data to life with SVG, Canvas and HTML. :bar_chart::chart_with_upwards_trend::tada:

deeplabcut

Markerless pose estimation of user-defined features with deep learning for all animals, including humans

deepof

DeepLabCut based data analysis package including pose estimation and representation learning mediated behavior recognition

els_project

fiberphotometry

basic routines for reading, visualizing and analyzing fiberphotometry recordings

gergelyturi.github.io

gergogithubcode

hallpassvr

virtual reality environment for mice

mouse-head-holder

Machine drawings and files for a mouse head holder for neuroscience research

nagykozosproject

neurite_fish_quant

Python code for quantification of FISH puncta in neurites

nsf-reu

NSF REUsite at NYSPI

nyspi-reu

test website for nyspi-reu site

optoimaging

Description of in vivo optogenetic activation during two-photon imaging (Turi et al. 2019 Neuron)

pupillometry-rig

pupillometry rig

pvsnp

a Python toolbox for reproducible analysis and visualization of NeuroPhysiological data.