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benchmarks

Translator Winter 2023 Relay

biolink-model

Schema and generated objects for biolink data model and upper ontology

clinical_risk_kp

di_aneurysm

ehr_error_notes

Predict which EHR/EMR (electronic health/medical records) contain an error

flask-framework

Basic template for using Flask on Heroku

it-cert-automation-practice

Google IT Automation with Python Professional Certificate - Practice files

modbase_aegypti

Script that takes protein models from ModBase and preps it for structural neighbor search in PrePPI

multiomics_abcd_kp

ETL of the Adolescent Brain Cognitive DevelopmentSM (ABCD) Study for NCATS Biomedical Translator

multiomics_clinicaltrials_kp

ETL of ClinicalTrials.gov data for NCATS Biomedical Translator

omics_to_omop

This project will describe how to pass a clinical report format to omop and import data from omop to that report

orion

Code that parses datasets from various sources and converts them to load graph databases.

scrna_aneurysm

streamlit-framework

Basic template for using Streamlit on Heroku

translator-api-registry

This repo hosts the API metadata for the Translator project

translator-developer-documentation

Official Developer Documentation repository for the Biomedical Data Translator: https://translator-developer-documentation.readthedocs.io/en/latest/