gkaguirrelab Goto Github PK

aguirre_2016_plosone

Code and data for this publication

aguirre_2017_iovs

Code and processed data for Aguirre et al., IOVS 2017

aguirre_2019_natscireports

Code to produce the figures for this publication

blnk_2023_expt

Starting repo for the analysis of the trigeminal sensitivity blink data

calccorticalmag

Derive cortical magnification from visual areas defined by the bayesPRF routine

cgrpanalysis

Analysis of Kaiser light sensitivity data

combiairtoolbox

Arduino code and API to control active air puff device created by Vincent Lau

combiexperiments

Experiments that make use of the CombiAir and CombiLED toolboxes

combiledtoolbox

Toolbox for the Prizmatix CombiLED light engine

crseyetrackingwindowstoolbox

Software routines for running and analyzing experiments in the OneLight/VSG eye tracker tandem in the Brainard and Aguirre Labs

datta_2012_plosone

A digital atlas of the canine brain

debruijn

Software for the generation de Bruijn sequences for neuroscience experiments

eyetracktomeanalysis

analysis code for processed eye and pupil tracking data from the University of Pennsylvania HCLV Connectome project

fixeltomeanalysis

Analysis code and Flywheel gear files for TOME fixel-based diffusion analysis

flywheelmrsupport

Routines to support the analysis of structural and functional MRI data in the Flywheel environment

fmriblockfrequencydirectionanalysis

Code for the analysis of blocks of fMRI data. Originally written to analyze data collected at Mt. Sinai at 7T, using 12 second blocks of stimulation, varying flicker frequencies and modulation directions.

fmrimelanopsinmrianalysis

Project repository for the analysis of melanopsin MRI measurements in the Aguirre/Brainard Labs at the University of Pennsylvania

forwardmodel

forwardmodelwrapper

Wrapper and validation code to support compilation of the forwardModel function

freesurfermatlablibrary

matlab library distributed with freesurfer v5.3.0

fwgearbuilder

Code to assemble gears for use on the Flywheel platform

gkaguirrelab.github.io

Organization homepage

gkamodeleye

An anatomically accurate, ray-traced model eye in MATLAB.

hclv

Project repository for the Human Connectome Low Vision project

headingmodel

A model of neural response to heading orientation in the forwardModel framework

iadapt

Python code for an on-line test of precision and perceptual adaptation

kaiser_2019_cephalalgia

Data and analysis code for this publication

kaiser_2024_psychophysiology

Analysis of blink response data using the BlinkCNS device

lfcontrastanalysis

Analysis code for the LFContrast project.

livetrackfmritoolbox

Toolbox to operate the LiveTrackAV eyetracking camera under protocols developed by GKAguirre Lab at the University of Pennsylvania.